Petrocella atlantisensis: PATL70BA_2225
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Entry
PATL70BA_2225 CDS
T05737
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PATL70BA_2225 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_2225 (nth)
Enzymes [BR:
cbar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PATL70BA_2225 (nth)
DNA repair and recombination proteins [BR:
cbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PATL70BA_2225 (nth)
Prokaryotic type
PATL70BA_2225 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
SWIRM-assoc_3
Motif
Other DBs
NCBI-ProteinID:
VDN48115
UniProt:
A0A3P7NYQ8
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All DBs
Position
1:2241848..2242531
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AA seq
227 aa
AA seq
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MIDKKRMERILDQLDEVYGKEHVCYLNNENDWQLLIATQLSAQCTDDRVNMVTPALFEEF
DSVQAFAEADIRNIEKAIHSTGFYRNKAKNIQACCQLLLTKHGGKVPVDIDALTALPGVG
RKTANVVLGHKYNIPAIVVDTHVKRISNKLGFTEFTDPVKIEFDLMGKIPKEHWLRYNTQ
IIAHGRTLCTARSPKCEQCFLLKDCPGGLYELYSRIVKNEGWAKEKE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgatagacaagaagagaatggaaagaattctagatcagttggacgaggtatatggtaag
gagcatgtctgctatttgaataatgaaaatgactggcaactcttaattgcaacccaatta
agtgcccagtgtacggatgatcgtgtcaatatggtcacgccggccttgtttgaagaattt
gattctgtgcaggcttttgcagaggcggatattcgtaatattgaaaaagccatacattca
accggcttttatagaaacaaagcgaaaaatatacaagcctgttgccaactgctcctcacc
aaacatggtggtaaggttcctgtggatattgatgcactaacggccctgccgggtgttggt
agaaaaacggccaatgtcgtattggggcacaaatataatattccggcgattgttgtagat
actcatgttaagagaatatctaacaaattgggatttacggaattcaccgaccctgttaaa
atagagtttgatttaatgggaaaaataccaaaagagcattggctcagatacaatacacag
attatcgctcatgggcgtaccttgtgtacagctcgttcaccaaaatgtgagcaatgcttt
ttgcttaaggattgccccggtggactttatgaactgtactcgagaatcgttaagaacgaa
ggatgggcaaaggagaaagaatga
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