KEGG   Cryptococcus bacillisporus: 91985495
Entry
91985495          CDS       T11001                                 
Symbol
I312_105450
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cbas  Cryptococcus bacillisporus
Pathway
cbas03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cbas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    91985495 (I312_105450)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbas03400]
    91985495 (I312_105450)
Enzymes [BR:cbas01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     91985495 (I312_105450)
DNA repair and recombination proteins [BR:cbas03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     91985495 (I312_105450)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT DNA_ligase_A_C RNA_ligase LIG3_BRCT PTCB-BRCT RTT107_BRCT_5 Neuralized
Other DBs
NCBI-GeneID: 91985495
NCBI-ProteinID: XP_066609343
LinkDB
Position
9:join(716135..716410,716469..716600,716657..716793,716852..716937,716988..717124,717177..717381,717435..717513,717570..717655,717703..717738,717789..717987,718051..718156,718210..718331,718392..718451,718506..718594,718643..718667,718721..718764,718814..718939,719047..719113,719166..719199,719257..719341,719395..719523,719583..719685,719743..720133,720188..720298,720351..720401,720457..720551,720602..720739,720793..720869,720922..720938)
AA seq 1080 aa
MAVHAPYYHAPPPTQEINGEKPTLAAATTLERPADCINRGQYPAFYIICGYLNRLRADAP
HKKYELLMRIFGNWREKVGPDLYPLIRLLLPDKDRERPVYNLKESMLARCYIDILSLEKH
SEAAQRLIKWKQPAEGSSNPTGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKM
KQAEYVPILKAINMQCTAEEQEWIIRIILKDLHISIRERGVLSAFHPDAIDLYSICSDLK
RVCWTLYDPGFRLNKNETHLELFHSFVPQLCGRMNDASLENIAKAIGAPKEFIMEEKLDG
ERIQLHMRGNGAQWFYCSRKAKDYTYLYGAHPGEGSLTRYIANAFQDNVRNIILDGEMMV
WDPVVERYLAFGTLKSAALDHFNDETAPRPCFKVFDILFLNDHCLSRKRLSERKRLLRSG
KIFKNIEDYKGRLEFVDEKRGKSAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDW
IKVKPEYSDQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTVEQPSFKTFCS
IGSGMSYSDYEWILNKHKKHWKPFDRSNPPPFMKLGPVGLDDKPDVYIEPENSFVIEVKA
SEIVPAGGGYGIGFTLRFPRCKYIYYDRNSRDYELDDESKERDMWTCVKRADFMDLFSRP
KRSYDDSQGPGKKKKRKVVRSKKNHIITNFRGQKLSDIDVETSIFSDMTFYIAKGTSGYP
KADLEALVHKHGADFTQAQLSDLSAIVIAPDQKSPLVRAQIRHGVNVIKPEWIFESIARR
KALPLLKEFLVYASEEAQEGRYYNKTLEQYDKVSFVRDRTGETLFEEDGDADVEEEVMDD
EDKDEIDMEEAREAKDRRMAREVLKERESNRSLEQKKLQEAWGLRSRASTGGSDSEAEEI
KSLKEESDTDSERIRRLRAIYQDEEDEENDSHESDVGVDGDGYRPVPLNGLNDKEEGLMG
ESPEAMHYDEDRIFYHLAFYIDTPENAAVNGLESSSPSLNAQERFAKIEKLLAENGGRAV
KSISDPKLTHIIMDDEDSGRYVELTRKTALPRRKHIVTPKWVEDCVDEETLLDEDLYKPR
NT seq 3243 nt   +upstreamnt  +downstreamnt
atggcagtccatgctccatattatcatgcgcctccgcccacgcaggaaataaatggcgag
aagccaacattagccgcagcgacaaccctcgaacgtccagcggactgtatcaaccgcggc
cagtatcccgctttctacattatctgcggctatctgaacagattacgggcagatgctcca
cataaaaagtatgagcttctgatgaggatatttgggaactggagggagaaagtagggccg
gacctttatccgttgatcaggttgttgttacctgataaagatagggaaaggcccgtgtat
aatttgaaagagtcaatgttagctcgatgctacattgatatattgtcgttggagaagcat
agcgaggcggctcagaggctgatcaaatggaagcaacctgcagaaggttcctcaaatcca
accggagattttgccaaagtctgttacaatgagataaaagctcgatccaccgtggaggaa
ggtcagctgagtgttgaggcggtaaatatgcttctcgataagcttgccgttgggaaaatg
aagcaagcagaatacgtgccgatactcaaggctatcaatatgcaatgcacagctgaggaa
caagaatggattatccggatcattctcaaagacttgcacatttcaatacgtgaacgagga
gttttatcagcgttccatcctgatgcgatagatctgtatagcatctgttcagaccttaag
cgtgtctgttggactttatatgatcccggcttcaggctcaataaaaatgagacacatctt
gaattattccactcctttgtgccccaattatgtggccgcatgaatgatgcctcacttgaa
aatattgcaaaggcgattggagctccaaaagaattcatcatggaagaaaagttggacggg
gagaggatacaattacacatgagaggcaatggtgcacaatggttctattgttcaaggaaa
gccaaagactatacatatctgtatggtgcccatccaggagagggaagtttgactcgctat
atagctaatgccttccaggacaatgtaagaaatatcattcttgatggggaaatgatggtt
tgggatcctgtagtggaacgttacctggctttcggaaccctcaagtcggctgcacttgac
catttcaatgatgaaaccgccccgcgtccatgttttaaagtattcgacatacttttcttg
aacgatcattgcctttcccgcaaacgtttatcagaacgcaagcgccttcttcgttctgga
aaaattttcaagaatattgaggattacaaggggagattggaatttgtagacgaaaaaaga
gggaagagcgcaaaggacattagggagtatttggagagagtggtcgaaaccaagggcgaa
ggtctagtggttaagaagacggatgtaatctatcaaacaaactcgagaggatatgactgg
atcaaggtcaagcccgagtatagtgaccaaatgggtgagaatcttgaagtcttagtgttg
ggcggatggtggggtaaaggaggacgttcagggaagatttcaagattactctgcggatta
agagagcaggcgtttgacgatggcacagtcgagcaaccgagcttcaagactttttgttcg
atcggttctggaatgagctattcagactacgagtggattttgaataaacacaagaagcac
tggaagccctttgataggtccaatccacccccatttatgaaacttgggccagtgggttta
gacgacaagccggatgtttatatcgaaccggagaactctttcgtcatcgaagttaaagcg
tctgaaattgtgccggccggcggaggctacggaataggatttactcttcgttttccacgc
tgcaaatacatctactacgacaggaatagtcgagactatgagctggacgatgagtcaaag
gagagggatatgtggacttgtgtaaaacgggcagatttcatggacctcttctcaaggccc
aaaagatcatatgatgatagtcaaggtcctgggaaaaagaagaagcgcaaggtggtcagg
tctaaaaaaaaccacatcatcaccaatttccgaggtcagaagctttcagatatagatgtg
gagacgagcatattcagcgatatgacgttttatattgcaaaaggcacatctggatacccg
aaagctgatctcgaagcacttgtgcataagcacggtgcagatttcacgcaagctcagcta
tccgacttatcagcaatcgtcatcgctcccgatcaaaagagccctctagtacgagcccag
atccggcacggggtcaacgtcatcaagccagaatggatatttgagagtattgcacggagg
aaagctttgcctttgttgaaggagttcctggtctacgcgtcggaagaagctcaagaggga
cgatactacaataagacactagagcaatatgacaaggtttcttttgtacgtgatcgtacc
ggcgagacactcttcgaagaagatggcgatgccgatgtcgaagaagaggttatggatgat
gaggacaaagatgagattgacatggaagaagctcgagaagccaaggacagaaggatggcc
agagaagttctcaaagagagagaatcgaatagatcactggaacagaagaagcttcaggaa
gcatggggcctgagatcaagagcgagtacgggaggttccgatagtgaagctgaggaaatt
aaatcgttgaaggaggagagtgacacagattcggaaagaattagaagactccgggccatt
taccaggacgaagaggacgaagaaaacgacagtcatgaatcagatgtcggtgtagatgga
gatggttacagaccggtccccctcaacgggttaaatgacaaggaggagggacttatggga
gagagtccagaggcaatgcactatgatgaagatcgaattttctatcatctcgcattttac
atcgatactcccgagaacgctgcggtcaacggcttggaaagctcgtctccctctctcaac
gcccaagaaagattcgccaagatagaaaagttgttggcagagaacggtggacgtgcggtg
aaaagcatctccgatcccaagctcacgcacattataatggatgatgaggattcaggaaga
tacgtcgagttgacgaggaagactgccctgcccagaaggaaacacatcgtgactcccaaa
tgggtggaggattgcgtagatgaagagacattgctggacgaagatttatataaaccgagg
tag

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