Cellulophaga baltica 18: M666_17735
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Entry
M666_17735 CDS
T03565
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cbat
Cellulophaga baltica 18
Pathway
cbat03030
DNA replication
cbat03410
Base excision repair
cbat03420
Nucleotide excision repair
cbat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M666_17735
03410 Base excision repair
M666_17735
03420 Nucleotide excision repair
M666_17735
03430 Mismatch repair
M666_17735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbat03032
]
M666_17735
03400 DNA repair and recombination proteins [BR:
cbat03400
]
M666_17735
Enzymes [BR:
cbat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
M666_17735
DNA replication proteins [BR:
cbat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M666_17735
DNA repair and recombination proteins [BR:
cbat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
M666_17735
NER (nucleotide excision repair)
GGR (global genome repair) factors
M666_17735
MMR (mismatch excision repair)
DNA ligase
M666_17735
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M666_17735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
HNOB
HHH
Auto_anti-p27
RNA_ligase
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AIZ43232
UniProt:
A0AAU8RXC3
LinkDB
All DBs
Position
complement(4110754..4112754)
Genome browser
AA seq
666 aa
AA seq
DB search
MDSKQKIEALRLALREHNYNYYVLDTPTISDYEFDMQLKELQDLEAKHPEFYDATSPSLR
VGGMVTKNFNTVVHESRMYSLDNSYSKEDLEDWEKRIQRNLGDVPVEFTCELKYDGASIS
ITYENGQLVRALTRGDGFQGDDVTNNIKTIKSIPLQLKGDYPPKFDIRGEIVLPFEGFAK
MNAERIENGEDPYMNPRNTASGSLKLQDSALVAQRPLECLLYGIVGEKTGIESQFQMLEK
ARVWGFKVPTVAKLCTSTDEVMAFVEYWDIHRHELPYETDGVVIKVNNLQHQEELGYTSK
SPRWAMAYKFKAEQVSTLLNEITYQVGRTGAITPVANLVPVLLAGTTVKRASLHNADQIA
KFDIREGDTVFVEKGGEIIPKIIGVDFAQRPENSEPTKYIEHCPECNTVLERTEGDAKHY
CPNFYGCPPQITGRIQHYISRKAMDIEGLGGETVELLYKEQLIKNYADLYTLTKAQVMPL
ERMAEKSAENLINGVKASVNIPFERVLFALGIRFVGETVAKKLAKAYKNMDALKIASVEE
LVKVDEIGERIATSVVEFFQNETNQETIERLKSYGVQFELSAEKLENQTEELKGQTFVVS
GVFEKVSRDELKKLIEDNGGKVGSSVSSKTTFLVAGDKMGPSKRTKAENLGVAIITEDDF
LALLDS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggatagtaagcaaaaaatagaagcactaaggttagcacttagagaacataattacaat
tattacgtactagatacgccaacgatatctgattatgaatttgacatgcaattaaaagaa
ttgcaagatttggaagcgaaacacccggagttttatgatgctacatcgccaagcttacgt
gtgggtggtatggtaaccaaaaactttaataccgtggtgcatgagagtcgcatgtattct
ttagacaacagttactccaaagaggatttagaagattgggaaaaacgtatacagcgtaat
ttaggggatgttcctgtagaatttacgtgtgagcttaagtatgacggggcatcaattagt
atcacttatgaaaacggacagttggttcgggcattgacacgtggagatggttttcaaggt
gatgatgtgacgaataatataaagacgataaaatcaattcctttacaattaaaaggcgat
tatccgcctaagtttgatattcgtggtgagattgttttaccatttgaaggctttgcaaaa
atgaatgcggaacgtatagaaaatggggaagatccatatatgaatccaagaaacacagcc
tctgggagtttaaaacttcaagatagtgcgctagtggcgcaacggcctttagagtgttta
ctttatggcattgtaggagaaaaaaccggtatagaatctcagtttcaaatgttagaaaag
gctagggtttgggggtttaaagtgccaacggttgcaaagctttgtacatctacagatgaa
gtaatggcttttgtagaatattgggatattcatagacatgaattgccgtatgaaacggat
ggggtggtaataaaagtaaataacctacagcatcaagaagagttagggtatacctctaaa
tctccgcgttgggccatggcttataaatttaaggcagagcaggtttccactcttttaaat
gagattacgtatcaagtaggtagaacaggagccattacgccagtagctaatttagtccct
gttcttttagccggaactacggtaaaaagagcttctttacacaatgctgatcaaattgca
aaatttgatattcgtgaaggagataccgtttttgtggaaaaagggggagaaattattcca
aaaattataggtgtagattttgcacaaagaccagaaaattctgaaccaacaaaatatata
gagcattgcccagaatgtaatacggttttagaacgtactgagggcgatgcaaagcattat
tgccctaatttctacggatgccctcctcaaataacgggcagaattcaacattacatttct
cgtaaagcaatggatattgaaggtctgggaggtgaaacggtagagttgctgtataaggag
caactgattaaaaattatgccgatttatatacgctaaccaaagctcaagtaatgccctta
gagcgtatggcagagaagtctgcagagaatttgattaacggagttaaagcgtctgttaac
atcccttttgaacgtgtgctttttgcattaggtatacggtttgtaggtgaaactgtggct
aaaaaattggcgaaagcttacaaaaatatggatgctttgaaaattgcatcagtagaagag
ttggtgaaagttgatgaaattggagagcgtattgctactagtgtggttgagttttttcaa
aatgaaaccaatcaggaaactattgagcgtttaaaaagttatggtgtacaatttgaatta
tctgctgaaaaattagaaaaccagacagaagaattaaaaggacaaacctttgtggtttct
ggtgtttttgaaaaagtaagtagggatgagcttaaaaaacttattgaagacaatggtggt
aaagtagggtcatcggtatcttccaaaactacttttttagtagccggagataaaatgggg
ccgagtaaacgaactaaagcagaaaatttaggggtagccattatcacagaagatgatttt
ctagccctcttggattcttaa
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