KEGG   Cellulophaga baltica 18: M666_17735
Entry
M666_17735        CDS       T03565                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cbat  Cellulophaga baltica 18
Pathway
cbat03030  DNA replication
cbat03410  Base excision repair
cbat03420  Nucleotide excision repair
cbat03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M666_17735
   03410 Base excision repair
    M666_17735
   03420 Nucleotide excision repair
    M666_17735
   03430 Mismatch repair
    M666_17735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbat03032]
    M666_17735
   03400 DNA repair and recombination proteins [BR:cbat03400]
    M666_17735
Enzymes [BR:cbat01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     M666_17735
DNA replication proteins [BR:cbat03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     M666_17735
DNA repair and recombination proteins [BR:cbat03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     M666_17735
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M666_17735
   MMR (mismatch excision repair)
    DNA ligase
     M666_17735
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      M666_17735
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 Nlig-Ia PTCB-BRCT BRCT_2 HNOB HHH Auto_anti-p27 RNA_ligase HHH_8
Other DBs
NCBI-ProteinID: AIZ43232
UniProt: A0AAU8RXC3
LinkDB
Position
complement(4110754..4112754)
AA seq 666 aa
MDSKQKIEALRLALREHNYNYYVLDTPTISDYEFDMQLKELQDLEAKHPEFYDATSPSLR
VGGMVTKNFNTVVHESRMYSLDNSYSKEDLEDWEKRIQRNLGDVPVEFTCELKYDGASIS
ITYENGQLVRALTRGDGFQGDDVTNNIKTIKSIPLQLKGDYPPKFDIRGEIVLPFEGFAK
MNAERIENGEDPYMNPRNTASGSLKLQDSALVAQRPLECLLYGIVGEKTGIESQFQMLEK
ARVWGFKVPTVAKLCTSTDEVMAFVEYWDIHRHELPYETDGVVIKVNNLQHQEELGYTSK
SPRWAMAYKFKAEQVSTLLNEITYQVGRTGAITPVANLVPVLLAGTTVKRASLHNADQIA
KFDIREGDTVFVEKGGEIIPKIIGVDFAQRPENSEPTKYIEHCPECNTVLERTEGDAKHY
CPNFYGCPPQITGRIQHYISRKAMDIEGLGGETVELLYKEQLIKNYADLYTLTKAQVMPL
ERMAEKSAENLINGVKASVNIPFERVLFALGIRFVGETVAKKLAKAYKNMDALKIASVEE
LVKVDEIGERIATSVVEFFQNETNQETIERLKSYGVQFELSAEKLENQTEELKGQTFVVS
GVFEKVSRDELKKLIEDNGGKVGSSVSSKTTFLVAGDKMGPSKRTKAENLGVAIITEDDF
LALLDS
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggatagtaagcaaaaaatagaagcactaaggttagcacttagagaacataattacaat
tattacgtactagatacgccaacgatatctgattatgaatttgacatgcaattaaaagaa
ttgcaagatttggaagcgaaacacccggagttttatgatgctacatcgccaagcttacgt
gtgggtggtatggtaaccaaaaactttaataccgtggtgcatgagagtcgcatgtattct
ttagacaacagttactccaaagaggatttagaagattgggaaaaacgtatacagcgtaat
ttaggggatgttcctgtagaatttacgtgtgagcttaagtatgacggggcatcaattagt
atcacttatgaaaacggacagttggttcgggcattgacacgtggagatggttttcaaggt
gatgatgtgacgaataatataaagacgataaaatcaattcctttacaattaaaaggcgat
tatccgcctaagtttgatattcgtggtgagattgttttaccatttgaaggctttgcaaaa
atgaatgcggaacgtatagaaaatggggaagatccatatatgaatccaagaaacacagcc
tctgggagtttaaaacttcaagatagtgcgctagtggcgcaacggcctttagagtgttta
ctttatggcattgtaggagaaaaaaccggtatagaatctcagtttcaaatgttagaaaag
gctagggtttgggggtttaaagtgccaacggttgcaaagctttgtacatctacagatgaa
gtaatggcttttgtagaatattgggatattcatagacatgaattgccgtatgaaacggat
ggggtggtaataaaagtaaataacctacagcatcaagaagagttagggtatacctctaaa
tctccgcgttgggccatggcttataaatttaaggcagagcaggtttccactcttttaaat
gagattacgtatcaagtaggtagaacaggagccattacgccagtagctaatttagtccct
gttcttttagccggaactacggtaaaaagagcttctttacacaatgctgatcaaattgca
aaatttgatattcgtgaaggagataccgtttttgtggaaaaagggggagaaattattcca
aaaattataggtgtagattttgcacaaagaccagaaaattctgaaccaacaaaatatata
gagcattgcccagaatgtaatacggttttagaacgtactgagggcgatgcaaagcattat
tgccctaatttctacggatgccctcctcaaataacgggcagaattcaacattacatttct
cgtaaagcaatggatattgaaggtctgggaggtgaaacggtagagttgctgtataaggag
caactgattaaaaattatgccgatttatatacgctaaccaaagctcaagtaatgccctta
gagcgtatggcagagaagtctgcagagaatttgattaacggagttaaagcgtctgttaac
atcccttttgaacgtgtgctttttgcattaggtatacggtttgtaggtgaaactgtggct
aaaaaattggcgaaagcttacaaaaatatggatgctttgaaaattgcatcagtagaagag
ttggtgaaagttgatgaaattggagagcgtattgctactagtgtggttgagttttttcaa
aatgaaaccaatcaggaaactattgagcgtttaaaaagttatggtgtacaatttgaatta
tctgctgaaaaattagaaaaccagacagaagaattaaaaggacaaacctttgtggtttct
ggtgtttttgaaaaagtaagtagggatgagcttaaaaaacttattgaagacaatggtggt
aaagtagggtcatcggtatcttccaaaactacttttttagtagccggagataaaatgggg
ccgagtaaacgaactaaagcagaaaatttaggggtagccattatcacagaagatgatttt
ctagccctcttggattcttaa

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