Cognaticolwellia beringensis: B5D82_00370
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Entry
B5D82_00370 CDS
T05628
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber00300
Lysine biosynthesis
cber00550
Peptidoglycan biosynthesis
cber01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B5D82_00370
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B5D82_00370
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cber01011
]
B5D82_00370
Enzymes [BR:
cber01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
B5D82_00370
Peptidoglycan biosynthesis and degradation proteins [BR:
cber01011
]
Precursor biosynthesis
Amino acid ligase
B5D82_00370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
NAD_binding_5
Motif
Other DBs
NCBI-ProteinID:
ASP46363
UniProt:
A0A222G433
LinkDB
All DBs
Position
83069..84691
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AA seq
540 aa
AA seq
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MFDHALDVSNASKNFAAIEAVLSVGEITLSSSELTKLKARFKVQLSAQNSQQSAVAKANL
VNDTRALNAGDVFCAVIGSLRDGREYVEQAISANCAMILQETTEQSAHGQLTWLEQVPGS
QLPVLSYFQLNDNLFNVAKAFYAEPQKSLNIIGITGTNGKTSTSQIIANLLDYCHKNCAV
IGTNGAGKLAQLQTIENTTPGATELHQLLALFIEQNITDVAMEVSSHALAQKRVSARLFN
TAVFTNLSRDHLDYHQTMSAYAAAKQEIFTGDNKQVAVINGDDKQAQKWLENWPKAQAVV
VYGRDKHIADYARFAQALNVKHHANGVSFQLITEQGECEIHSQLLGDFNVENLLAAIAVL
MVENIALTTIAKAITQLVPIIGRMEAFSSAGKPTTVVDYAHTPDALASALDACRLHCHGK
LWLVFGCGGDRDVGKRALMAKVAESKADHMIITNDNPRSEDPESIAADIIAGLGETTNFE
KILDRETAILSALTQAAADDVVLCAGKGHENTIIFGNEKRHYDERAVVKAFYSAEKEVTV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcacgctttagacgtttctaatgcatcgaaaaactttgccgctattgaagcg
gttttaagcgttggtgaaataacgctttcatcaagtgaactcacaaaattgaaagcacga
tttaaagtacaattatccgcgcaaaatagtcagcaatcagccgtagctaaggccaactta
gtgaatgatacgcgtgcactaaatgccggtgatgtattctgtgcggttatcggtagctta
cgcgacggtcgtgaatatgtagaacaagcaatatcggcaaactgcgccatgatattgcaa
gaaaccactgaacaatcagcacatgggcaattaacatggcttgaacaggtgccaggctca
caattgcccgtgttgtcttactttcagttaaacgataatttatttaatgtcgccaaagca
ttttatgctgagccacaaaaatctttaaatattattggcattaccggcaccaatggtaaa
accagcacaagccaaattattgccaatttactcgattattgtcataaaaattgtgccgtt
attggcaccaatggcgcaggtaaacttgcgcaactgcaaactattgaaaataccacgcca
ggcgcaacagaattacatcagctattggcactctttatcgagcaaaatattaccgatgtt
gccatggaagtgtcatcacatgccttggcacaaaaacgcgtcagtgcgagattatttaat
actgctgtgtttacaaatttaagccgcgatcatttagattatcaccaaaccatgtctgcg
tatgccgcagcgaaacaagaaatatttaccggtgataataagcaagttgcggttattaat
ggcgacgacaaacaggcgcaaaaatggctcgaaaattggccaaaagcacaagccgttgtg
gtgtatggtcgagataaacatattgcagattatgcccgcttcgcacaagcgttaaatgtt
aagcatcatgctaacggggttagcttccaactgattaccgagcaaggcgaatgtgaaatt
catagccagttgttaggtgactttaatgttgaaaacctcttagctgctattgccgtgtta
atggttgagaacatagcactaactacaattgccaaagcgatcacccagcttgtgcccatt
attggtcgcatggaagcattttcgtcagcgggtaaacctacgactgtagtagattacgcc
cataccccagatgcactggctagcgcgttagatgcttgtcgattacattgccatggcaaa
ctatggctggtatttggctgcggtggtgacagagatgtgggtaagcgagcattaatggcg
aaagttgccgaaagtaaagcggatcatatgatcattactaacgacaatcctcgcagcgaa
gaccctgaaagcatagccgcagatattattgcaggcttaggggaaacaacgaattttgaa
aaaatattagatagagaaactgccattttatcagcattaacacaagcagctgccgatgat
gtcgtgctttgtgccggaaaaggccatgaaaacaccattatttttggcaatgaaaaacgc
cattatgatgaacgtgctgtagtaaaagctttttattcagcagaaaaagaggtgacggta
tga
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