Cognaticolwellia beringensis: B5D82_16490
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Entry
B5D82_16490 CDS
T05628
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B5D82_16490 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_16490 (nth)
Enzymes [BR:
cber01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B5D82_16490 (nth)
DNA repair and recombination proteins [BR:
cber03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B5D82_16490 (nth)
Prokaryotic type
B5D82_16490 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ASP49225
UniProt:
A0A222GBD8
LinkDB
All DBs
Position
complement(3913283..3913945)
Genome browser
AA seq
220 aa
AA seq
DB search
MNKEKRIEMLSRLRDNDPNPTTELNFSSPFELLIAVLLSAQATDVSVNKATDKLYPIANT
PQALLDLGLDGLKSYIKTIGLFNTKAVNTLKTCQMLIDLHGGEVPQNRAALEALPGVGRK
TANVVLNTAFGWLKDNEGKYFIAVDTHIQRVANRTGYAKGKTVEETEQNIVKHTPRKTEF
FFNLHHWLILHGRYTCIARKPRCGSCIIEDLCDFKDKTED
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaaaacgaatagagatgctatctcgattaagggacaacgatccaaatccg
actaccgagcttaatttttcaagtccatttgagttattaatcgctgttttattatcggct
caagcgactgatgtaagcgttaataaagccacggataaactatacccgatagccaataca
ccacaagcactacttgaccttggtctagatggcttaaaatcgtatattaaaaccattggt
ttatttaataccaaggcggtaaatacgcttaaaacctgccaaatgttaattgatttacat
ggcggtgaagtaccacaaaaccgagcggcacttgaagccctacccggtgtgggcagaaaa
accgctaatgtagtattaaataccgcgtttggctggctaaaagataatgaaggtaaatac
tttatagccgtggatacacatatccagcgagtcgctaaccgcacaggttacgctaaaggt
aaaacagtagaagaaactgaacagaatattgtcaaacacacaccaagaaaaacagagttc
ttttttaatttacatcattggttaattctacatggccgatacacctgtattgctagaaag
ccccgctgcggatcatgtattatcgaagatttatgcgactttaaagataaaactgaagac
taa
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