KEGG   Campylobacter bilis: ACEN41_02500
Entry
ACEN41_02500      CDS       T11314                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cbii  Campylobacter bilis
Pathway
cbii03030  DNA replication
cbii03410  Base excision repair
cbii03420  Nucleotide excision repair
cbii03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACEN41_02500 (ligA)
   03410 Base excision repair
    ACEN41_02500 (ligA)
   03420 Nucleotide excision repair
    ACEN41_02500 (ligA)
   03430 Mismatch repair
    ACEN41_02500 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbii03032]
    ACEN41_02500 (ligA)
   03400 DNA repair and recombination proteins [BR:cbii03400]
    ACEN41_02500 (ligA)
Enzymes [BR:cbii01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     ACEN41_02500 (ligA)
DNA replication proteins [BR:cbii03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ACEN41_02500 (ligA)
DNA repair and recombination proteins [BR:cbii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     ACEN41_02500 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ACEN41_02500 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     ACEN41_02500 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ACEN41_02500 (ligA)
SSDB
Other DBs
NCBI-ProteinID: XFG26775
LinkDB
Position
445213..447156
AA seq 647 aa
MTKEQYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFERENENEIAKDSPTQKV
APTIQSEFKKLSHLKPMWSMEDVFNEAELRAWVKRIKNEKNFFIEPKFDGASLNLLYEEG
RLISGTTRGDGQVGEDITLNVFEINSIPKNISYKERIEIRGEVVILKEDFEKINQKRARL
NQSLFANPRNAASGSLRQLDTSITRDRNLKFYPWGIGENSLNFTTHSQAMGFIRELGFLK
DDFIKVCKDVDEVLKAYEELLALREKKPMMMDGMVVRVDDLGLCDELGYTVKFPKFMVAF
KFPALEKTTRLIGVNLQVGRSGVVTPVAILEAVNLDGVVIRSASLHNFDEIARLDVRIND
FVSVIRSGDVIPKITKVFKDRRDGLELSIMRPKLCPTCQSELLDEGTLIKCQNIDCKDRL
VNSMIHFVSKKCLNIDGLGENIVELLYQNKKITTLESVFHLKSSDFEGLEGFKEKKINNL
LKAIENAKECELFRFITALGIEHIGEVAAKKLSMSFGLQWHKQDFQAYMNLEGFGEQMAL
SLCEFTRVNRIRIDEFYKLLNLKVEKTKIQDNSAIFGKSFVITGTLSQPREEFKALIESL
GGKLSASVSKKTDYVLFGQEAGSKLSKARELGVVCIDENAFNELIKK
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgacaaaagagcaatacttagaaaaagtggctttggcgaatttgtggatgagggcgtat
tatgaaaaagatgaacctttagcaagcgatgaagaatatgatgctttaatcagagaatta
agggcttttgaaagggaaaatgaaaatgagattgccaaagactctcccacgcaaaaagtc
gcgcctactatacagagtgagtttaaaaaactctcacatttaaagcctatgtggtctatg
gaggatgtttttaatgaggctgagttaagagcatgggtgaaacgtattaaaaatgaaaaa
aatttttttatagaacctaaatttgatggggcaagtttaaatttgctttatgaagagggg
agattaattagtggaactacaaggggtgatggtcaagtgggtgaggatatcacgcttaat
gtttttgaaatcaatagcattcctaaaaatatttcctataaagaaaggatagaaattcgc
ggtgaggtggttattttaaaagaagattttgaaaaaatcaatcaaaaaagagcacgttta
aaccaaagtttgtttgctaatcctcgcaatgctgcaagtgggagtttaagacagcttgat
acaagcattacaagggataggaatttgaaattttatccttggggtataggggagaatagt
ttaaattttactacccatagtcaagccatgggttttattagagagcttggttttttaaag
gatgattttatcaaggtttgcaaggatgtggatgaagttttaaaagcttatgaagagctt
ttagctttaagagaaaaaaagcccatgatgatggatggaatggtggtaagagttgatgat
cttgggctttgtgatgagcttggttatacagtaaaatttccaaagtttatggtggctttt
aaattccctgcacttgaaaaaaccacgcgtttaataggtgtgaatttacaagtaggaaga
agtggagttgtcacgcctgtggcgattttagaagcggtgaatttagatggggttgtaata
agatcagcaagcttgcataattttgatgaaattgcaagattggatgtgaggattaatgat
tttgtaagtgtgataagaagtggggatgtgatacctaagatcactaaggtctttaaagat
cgtcgtgatggcttggaattgagcattatgcgtcctaagctttgtcctacttgtcaaagt
gagcttttagatgagggcactttaataaaatgccagaatatagactgtaaagataggctt
gttaattctatgatccattttgtttctaaaaaatgcttaaatatagacgggcttggtgaa
aatatagtagagcttttgtatcaaaataaaaaaatcaccacgcttgaaagcgtttttcat
ttaaaatccagtgattttgagggtttagaaggctttaaagaaaaaaaaattaataatctt
ttaaaggctattgagaatgcaaaagaatgtgagctttttcgttttatcacggctttgggt
attgagcatattggtgaagttgctgctaagaaattaagcatgagctttggcttgcaatgg
cacaagcaagattttcaagcttatatgaatttagaaggttttggagaacagatggctttg
agtctttgtgagtttacgcgggttaatcgcataaggattgatgagttttataaactttta
aatttaaaagtagaaaaaacaaagatacaagataatagtgcgatttttgggaaaagcttt
gtgattacgggtacgctttcacagcctagagaagaatttaaagctttgatagaaagcctt
ggaggcaagttaagtgcttcagtttctaaaaaaacagattatgtgctttttggtcaagaa
gcaggatcaaagcttagcaaagctagggagcttggtgttgtatgtatagatgagaatgct
tttaatgaacttattaaaaaatag

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