Campylobacter bilis: ACEN41_02500
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Entry
ACEN41_02500 CDS
T11314
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cbii Campylobacter bilis
Pathway
cbii03030
DNA replication
cbii03410
Base excision repair
cbii03420
Nucleotide excision repair
cbii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACEN41_02500 (ligA)
03410 Base excision repair
ACEN41_02500 (ligA)
03420 Nucleotide excision repair
ACEN41_02500 (ligA)
03430 Mismatch repair
ACEN41_02500 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbii03032
]
ACEN41_02500 (ligA)
03400 DNA repair and recombination proteins [BR:
cbii03400
]
ACEN41_02500 (ligA)
Enzymes [BR:
cbii01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ACEN41_02500 (ligA)
DNA replication proteins [BR:
cbii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACEN41_02500 (ligA)
DNA repair and recombination proteins [BR:
cbii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ACEN41_02500 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACEN41_02500 (ligA)
MMR (mismatch excision repair)
DNA ligase
ACEN41_02500 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACEN41_02500 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XFG26775
LinkDB
All DBs
Position
445213..447156
Genome browser
AA seq
647 aa
AA seq
DB search
MTKEQYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRAFERENENEIAKDSPTQKV
APTIQSEFKKLSHLKPMWSMEDVFNEAELRAWVKRIKNEKNFFIEPKFDGASLNLLYEEG
RLISGTTRGDGQVGEDITLNVFEINSIPKNISYKERIEIRGEVVILKEDFEKINQKRARL
NQSLFANPRNAASGSLRQLDTSITRDRNLKFYPWGIGENSLNFTTHSQAMGFIRELGFLK
DDFIKVCKDVDEVLKAYEELLALREKKPMMMDGMVVRVDDLGLCDELGYTVKFPKFMVAF
KFPALEKTTRLIGVNLQVGRSGVVTPVAILEAVNLDGVVIRSASLHNFDEIARLDVRIND
FVSVIRSGDVIPKITKVFKDRRDGLELSIMRPKLCPTCQSELLDEGTLIKCQNIDCKDRL
VNSMIHFVSKKCLNIDGLGENIVELLYQNKKITTLESVFHLKSSDFEGLEGFKEKKINNL
LKAIENAKECELFRFITALGIEHIGEVAAKKLSMSFGLQWHKQDFQAYMNLEGFGEQMAL
SLCEFTRVNRIRIDEFYKLLNLKVEKTKIQDNSAIFGKSFVITGTLSQPREEFKALIESL
GGKLSASVSKKTDYVLFGQEAGSKLSKARELGVVCIDENAFNELIKK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagcaatacttagaaaaagtggctttggcgaatttgtggatgagggcgtat
tatgaaaaagatgaacctttagcaagcgatgaagaatatgatgctttaatcagagaatta
agggcttttgaaagggaaaatgaaaatgagattgccaaagactctcccacgcaaaaagtc
gcgcctactatacagagtgagtttaaaaaactctcacatttaaagcctatgtggtctatg
gaggatgtttttaatgaggctgagttaagagcatgggtgaaacgtattaaaaatgaaaaa
aatttttttatagaacctaaatttgatggggcaagtttaaatttgctttatgaagagggg
agattaattagtggaactacaaggggtgatggtcaagtgggtgaggatatcacgcttaat
gtttttgaaatcaatagcattcctaaaaatatttcctataaagaaaggatagaaattcgc
ggtgaggtggttattttaaaagaagattttgaaaaaatcaatcaaaaaagagcacgttta
aaccaaagtttgtttgctaatcctcgcaatgctgcaagtgggagtttaagacagcttgat
acaagcattacaagggataggaatttgaaattttatccttggggtataggggagaatagt
ttaaattttactacccatagtcaagccatgggttttattagagagcttggttttttaaag
gatgattttatcaaggtttgcaaggatgtggatgaagttttaaaagcttatgaagagctt
ttagctttaagagaaaaaaagcccatgatgatggatggaatggtggtaagagttgatgat
cttgggctttgtgatgagcttggttatacagtaaaatttccaaagtttatggtggctttt
aaattccctgcacttgaaaaaaccacgcgtttaataggtgtgaatttacaagtaggaaga
agtggagttgtcacgcctgtggcgattttagaagcggtgaatttagatggggttgtaata
agatcagcaagcttgcataattttgatgaaattgcaagattggatgtgaggattaatgat
tttgtaagtgtgataagaagtggggatgtgatacctaagatcactaaggtctttaaagat
cgtcgtgatggcttggaattgagcattatgcgtcctaagctttgtcctacttgtcaaagt
gagcttttagatgagggcactttaataaaatgccagaatatagactgtaaagataggctt
gttaattctatgatccattttgtttctaaaaaatgcttaaatatagacgggcttggtgaa
aatatagtagagcttttgtatcaaaataaaaaaatcaccacgcttgaaagcgtttttcat
ttaaaatccagtgattttgagggtttagaaggctttaaagaaaaaaaaattaataatctt
ttaaaggctattgagaatgcaaaagaatgtgagctttttcgttttatcacggctttgggt
attgagcatattggtgaagttgctgctaagaaattaagcatgagctttggcttgcaatgg
cacaagcaagattttcaagcttatatgaatttagaaggttttggagaacagatggctttg
agtctttgtgagtttacgcgggttaatcgcataaggattgatgagttttataaactttta
aatttaaaagtagaaaaaacaaagatacaagataatagtgcgatttttgggaaaagcttt
gtgattacgggtacgctttcacagcctagagaagaatttaaagctttgatagaaagcctt
ggaggcaagttaagtgcttcagtttctaaaaaaacagattatgtgctttttggtcaagaa
gcaggatcaaagcttagcaaagctagggagcttggtgttgtatgtatagatgagaatgct
tttaatgaacttattaaaaaatag
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