KEGG   Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_04615
Entry
IPM89_04615       CDS       T10208                                 
Name
(GenBank) efflux RND transporter permease subunit
  KO
K18138  multidrug efflux pump
Organism
cbly  Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly01501  beta-Lactam resistance
cbly01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:cbly00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    IPM89_04615
   01503 Cationic antimicrobial peptide (CAMP) resistance
    IPM89_04615
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cbly02000]
    IPM89_04615
   01504 Antimicrobial resistance genes [BR:cbly01504]
    IPM89_04615
Transporters [BR:cbly02000]
 Other transporters
  Electrochemical potential-driven transporters [TC:2]
   IPM89_04615
Antimicrobial resistance genes [BR:cbly01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    IPM89_04615
SSDB
Motif
Pfam: ACR_tran MMPL SecD_SecF_C
Other DBs
NCBI-ProteinID: QQS55107
LinkDB
Position
1018576..1021710
AA seq 1044 aa
MFLSDLFIQRPVFAIVVSLLIVVGGVMAVRDLPVRELPDVDASVVTVTTTYTGAAPAIVD
TEITEVIEGAVARIDGVKRIESGSSEGVGQTRITFTTGRDIDSAAADVREAVGSVSNRLP
EEADEPRVVKADSDSQPVMRVSLTSDRLSGEELTDLAERVVVDRLATVSGVGEVTVSGAR
RRAIRVWLDSEALAARGLTVGDVETALRRANVELPSGRLESSNRQLAVRVDSRLKTIEEF
RNLAIAQRDGYPIRLFELAKVEPGVEDDRSLVRTNGENSITLRVIRQSRANTLAVSAGVR
AELERIRPQLPDGVRMIVATDDALFIQASIDEVVVTLLIAVGVVVLVIFAFLYSLRATLI
PALTIPVSIIGAFMLLAALGFSINLLTLLALILAIGLVVDDAIVVLENAQRRVDHGEPPL
VAAYRGTRQVTFAVLATSAVLVAVYVPLSLLGGEIGKLFREFGLVLAAAVAISTFVALSL
TPMLCSQLLGRGATPNRFMRGAERAFAALERGYRTALNGALAMPLVVLAAAALLSIAALL
LYRDLPQELAPSEDRGVFFISVKAPEGATLAFTDAGVRKIERVLQPLFERGEAWRLVSII
GRGDSNRAFVVVGLTDWSQRARGQQAIVNALRGDLREIPDLRAIPISRSSLGRGASSQAV
QLVIGGPDYPTVVAWSEAVMARARDNPGLTSIDSDYQANQPTLRVEINRALADELGIPVE
RIAATLQTLLASREVTTYIDRGREYEVLLQAQAADRRQPGDLRGIFVRADKNGELAPLGA
VVDLREDDSALTLRRFDRLPAVTIDASLVGDYDLGRAIADLNRIAAETLPAEARVSLTGA
AESFLETSGGLYFTFGLALLIVFLVLAAQFESFIHPFIILLTVPVGVTGALLALLLTGQS
INLYSQIGCVLLIGLMAKNGILIVEFANQMRAQGLDVRAAVLAGASQRLRPILMTVLSTV
LGALPLALATGAGAESRLAIGVVVIGGLLLSTALTLFLTPVLYDLLARFTRPVNAIEQRL
TAQLRGEAPAVPPASSPPGLRERV
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgttcctgtccgatctgttcatccaacggccggtgttcgccatcgtcgtcagcctgctg
atcgtggtcggcggggtcatggccgtgcgcgatttgccggtgcgcgaactgccggatgtc
gatgcctcggtggtgaccgtcaccaccacttacaccggcgcggcgccggccatcgtcgat
accgagatcaccgaagtcatcgagggcgcggtggcccggatcgatggggtcaagcgcatc
gaatccggctccagcgaaggtgtcggccagacccggatcaccttcaccaccggtcgggac
atcgacagcgccgccgccgacgtgcgcgaggcggtgggttcggtgagcaaccgcttgccg
gaggaagccgacgagccgcgggtagtcaaggccgacagcgacagccaaccggtgatgcgg
gtttccctgaccagcgaccgcctgtccggcgaggaactgaccgatctggccgaacgggtg
gtggtggaccgcttggccacggtgtccggggtgggggaggtgacggtgagcggcgcccgc
cgccgcgccatccgggtctggctggacagcgaggccttggcggcgcgcggtctgaccgtc
ggcgacgtcgagaccgccttgcgccgggccaacgtggaactgccctccggccggctggaa
tccagcaaccggcaactggcggtgcgggtcgatagccgactgaaaaccatcgaggaattc
cgcaatctcgccatcgcccagcgcgacggttacccgatccgcctgttcgaactggccaag
gtggagccgggggtagaggacgaccgttccctggtgcgcaccaacggcgagaactccatc
accttgcgggtcatccgccagtccagagccaataccctggcggtatcggccggcgtgcgc
gccgagctggagcgtatccgcccgcaactgccggacggggtgcggatgatcgtcgccacc
gacgacgccctgttcatccaggccagcatcgacgaggtcgtggtgacgctcttgatcgcg
gtcggtgtggtggtgctggtcatcttcgccttcctctattcgctacgggccaccctgatt
ccggccttgaccatcccggtctcgatcatcggtgccttcatgctgctggcggcgctgggg
ttttcgatcaatctgctgaccctgctggccctgatcctggccatcgggctggtggtggac
gatgccatcgtggtgctggaaaacgcccagcgccgggtggatcacggcgagccgccgctg
gtcgcggcctatcgcggtacccgccaggtgaccttcgcggtgctggccaccagcgcggtg
ctggtggcggtctacgtgccgctgtcgctgctcggcggcgagatcggcaagctgtttcgg
gaattcgggctggtactggcggcggcggtggcgatttccaccttcgtggcgctgtcgctg
acccccatgctgtgctcgcaactgctggggcgcggcgcgacgcccaatcgcttcatgcgg
ggggcggaacgcgccttcgccgctctggaacgcggctatcggaccgccttgaacggcgcg
ctggcgatgccgctggtggtgctggccgccgccgcgctgctgagcatcgccgcgctgctg
ctgtatcgcgatctaccccaggaactggcgcccagcgaggatcgcggggtgttcttcatc
tccgtcaaggcgcccgaaggcgcgacgctggcgtttaccgatgccggcgtgcgcaagatc
gagcgggtgctacaacccctgttcgagcgcggcgaggcgtggcggctggtgtcgatcatc
ggccgcggcgacagcaatcgggcgttcgtggtggtcggcctcaccgactggagccagcgc
gcgcgcggccagcaggccatcgtcaacgcgctgcgcggcgatttgcgcgagattcccgat
ctgcgggccattccgatcagccgctccagcctggggcgcggcgccagctcgcaagcggtg
caactggtgatcggcgggccggactatccgaccgtggtggcctggagcgaggcggtcatg
gcccgcgcccgcgacaatccggggctgacctccattgatagcgattatcaggccaaccag
cccaccctgcgggtcgagattaaccgcgccctggccgacgaactgggcatcccggtcgag
cgcatcgccgccaccttgcagaccctgctggcctcgcgcgaggtgaccacctacatcgac
cggggccgcgagtacgaggtgttgctgcaggcacaagccgccgaccggcgccagccgggc
gatctgcgggggatcttcgtgcgcgccgacaagaacggcgaactggcgccgctcggcgcg
gtggtcgatctgcgcgaggacgactcggcgctgaccctgcgccgcttcgaccgcctgccg
gcggttaccatcgatgcttcgctggttggcgactacgatctcggccgagccattgccgat
ctcaatcgcatcgccgccgaaaccctgccggcggaggcgcgtgtctcgttgaccggtgcc
gccgagtcgtttctggaaacgtcgggcggcttgtatttcaccttcggcctggcgctgctg
atcgtgtttctggtgctggccgcccagttcgagagcttcatccatccgttcatcatcctg
ctgaccgtgccggtcggggtgaccggcgccttgctggccttgctgctgaccggtcagtcg
atcaatctctacagccagatcggttgcgtgttgctgatcggcctgatggccaagaatggc
attctgatcgtggaattcgccaatcagatgcgggcgcaaggcctggacgtgcgagctgcc
gtgctggccggcgccagccagcgcctgcgaccgattctgatgaccgtgctgtccacggtg
ctgggggcgttgccgctggcgctggcgaccggggccggcgccgaaagccggctcgccatc
ggtgtggtggtaatcggcgggttgctgctgtccaccgcgctgacgctgtttctgaccccg
gtgctatacgatctattggcgcggtttacccggccggtcaacgccatcgagcagcgattg
acggcgcaattgcgcggcgaagcgcccgccgttccgcccgcgagtagcccaccaggattg
cgcgagcgggtttag

DBGET integrated database retrieval system