Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_09915
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Entry
IPM89_09915 CDS
T10208
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00300
Lysine biosynthesis
cbly00550
Peptidoglycan biosynthesis
cbly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IPM89_09915
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IPM89_09915
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbly01011
]
IPM89_09915
Enzymes [BR:
cbly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IPM89_09915
Peptidoglycan biosynthesis and degradation proteins [BR:
cbly01011
]
Precursor biosynthesis
Amino acid ligase
IPM89_09915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QQS53227
LinkDB
All DBs
Position
2208380..2209903
Genome browser
AA seq
507 aa
AA seq
DB search
MSGLARSDLGSLLAGFAEVPAPLADRPVSGLASDSRAVRTGDLFFAVRGGCRHGLEFIDA
VRAAGALAVVWEPPHAGVPLVGVGAPPLLMVPELRQRMGLIASRFYGVPSERLRVIGITG
TDGKTSCAHFIAQALSDAEHGPCGILGTLGVGEYGRTAPSPHTTPDPLAVQGWLAQLVAA
DRRYAVMEVSSHALDQGRVNGVEFAVAGLTNLTRDHLDYHGTPEAYAAAKRRLFRDHRPG
RAVLNLDDAFGRALAAEPYAQTEVIAYGLGERPTRSDRFVWGEDLTLTSMGLRLRIRSSW
GDGELSAGVLGRFNASNLLAALATLLALDLPLTEALARLARTATVPGRMERLAGGPNQPL
AVIDYAHTPHALEQALRALREHGGGRLWCVFGCGGDRDAGKRPLMGAAAERWADRVTITD
DNPRGEDPQRIVRDILAGMRHPAAAVVIRDRRTAIAHTLAEAAPGDIVLIAGKGHEEHQI
VGTEKRPFSDRNVAGECLSSVGQAETA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcttggcgcggtctgacctgggttcactgctggcgggctttgccgaggtgccg
gcgcctctggccgatcggccggttagcgggctggcgagcgacagtcgcgcggttcggact
ggcgatctgtttttcgcggtgcgcggcggatgccgacatggtctggagttcatcgatgcg
gtgcgcgcggcgggagcgctggcggtggtttgggaaccgccccatgcgggtgtgccgttg
gtcggcgtgggcgctccacccttgttgatggtaccggaattgcgccagcgcatggggctg
atcgccagccgtttttacggcgtgccgtccgagcggttgcgggtgatcggcatcaccggc
accgacggcaaaacctcctgcgcccactttatcgcccaggcgttgagcgatgcggagcac
ggaccgtgcggcattctcggcaccttgggcgtcggcgaatacggtcggaccgcaccctcg
ccgcacaccacgccggacccgctggccgtgcaaggctggctagcccaactggtcgccgcc
gaccggcgttacgccgtcatggaagtgtcctcgcacgccctggatcaggggcgggtgaac
ggcgtcgaattcgcggtcgcggggctaaccaatctgacccgcgatcatctggattaccac
ggtacgccggaagcctacgcggcggccaagcgccggttgttccgcgaccaccgacccggc
cgggcggtgctgaatctggacgatgccttcggtcgcgccctcgccgccgaaccgtacgcc
cagaccgaagtgatcgcttacggtctgggcgagcgtccgacgcgttcggatcgcttcgtt
tggggcgaggatttgacgctgacctcgatgggactacggctgcgaatccgctcctcctgg
ggcgacggcgagctgtcggccggcgtgctgggccggttcaacgccagcaatctattggct
gccttggcgaccctgctggcgctggatctacctttgaccgaggcattggcacggttggcg
cgaaccgcgacggtgccgggacggatggaacggctggccggtggaccgaaccagccgctg
gcggtgatcgattacgcccacactccccacgccctggagcaggctttgcgtgccctacgc
gagcacggcggcgggcgcttatggtgcgtgttcggctgcggcggcgaccgcgatgccggt
aaacggccgctgatgggcgcggcggccgagcgttgggccgaccgggtaacgatcaccgac
gataatccgcgcggcgaggacccgcaacgcatcgtgcgcgacattctggccgggatgcgc
catcccgcggcggcggtggtgatccgcgaccggcggaccgccatcgcccacaccctggcc
gaagccgcgcccggcgacatcgtgctgatcgccggcaagggccatgaggagcaccagatc
gtcggcaccgaaaaacgacccttcagcgatcgcaacgtggcaggcgagtgcctgtcgtca
gtcggtcaggcggaaaccgcatag
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