Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_11700
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Entry
IPM89_11700 CDS
T10208
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
IPM89_11700 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbly03000
]
IPM89_11700 (dksA)
03021 Transcription machinery [BR:
cbly03021
]
IPM89_11700 (dksA)
03009 Ribosome biogenesis [BR:
cbly03009
]
IPM89_11700 (dksA)
Transcription factors [BR:
cbly03000
]
Prokaryotic type
Other transcription factors
Others
IPM89_11700 (dksA)
Transcription machinery [BR:
cbly03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
IPM89_11700 (dksA)
Ribosome biogenesis [BR:
cbly03009
]
Prokaryotic type
rRNA transcription factors
IPM89_11700 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
P53_tetramer
Motif
Other DBs
NCBI-ProteinID:
QQS53534
LinkDB
All DBs
Position
complement(2607795..2608220)
Genome browser
AA seq
141 aa
AA seq
DB search
MVATNPIAQGAPVSYQPAEGEAYMGDAQRTYFRQVLQDWKQGLLEEVSRTVNHMRDESTA
FPDPNDRATQEEEFSLELRTRDRERKLLKKINEALAQIESGDYGYCEACGVEIGLPRMQA
RPTATLCIDCKMLEEIREKQG
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctaccaatccgatcgcgcagggagcgcccgtgtcctaccagcccgccgaaggc
gaggcttatatgggcgatgctcaacggacttactttcgccaagttctccaagactggaag
caaggtctgctggaggaggtgagccgcacggtcaaccacatgcgggacgagtctaccgcg
tttcccgatcccaacgaccgcgctactcaggaagaggaattcagcctggaattgcgcacc
cgcgaccgggaacgcaagctgctcaagaaaatcaacgaggccctggctcaaatcgaaagc
ggcgattacggttattgcgaggcttgcggcgtggagatcgggctgccgcgcatgcaggct
cgtccgaccgccaccttgtgcatcgactgcaagatgctggaagaaatccgcgaaaaacaa
ggctag
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