Clostridium botulinum F 230613: CBF_0406
Help
Entry
CBF_0406 CDS
T01865
Name
(GenBank) DNA-binding response regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cbm
Clostridium botulinum F 230613
Pathway
cbm01502
Vancomycin resistance
cbm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CBF_0406
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CBF_0406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cbm02022
]
CBF_0406
01504 Antimicrobial resistance genes [BR:
cbm01504
]
CBF_0406
Two-component system [BR:
cbm02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CBF_0406
Antimicrobial resistance genes [BR:
cbm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CBF_0406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
Response_reg
Motif
Other DBs
NCBI-ProteinID:
ADF98198
LinkDB
All DBs
Position
429882..430403
Genome browser
AA seq
173 aa
AA seq
DB search
MDGIEACMKIREEKSMPIIMLSAKSEDMDKIIGLTTGADDYITKPFNPLELLARVKSQLR
RYIKLNNSNGNENEDIVTIEDITINVATHEVKIGDQPVRLTPREFDILELLARNRGVVFS
IEKIYELVWKEEFLDSNNTVMVHIRKLREKIEQNPRNPRYIKTVWGVGYKVEK
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggatggtatagaagcttgcatgaaaataagagaagaaaaaagtatgcctataataatg
ctttcagctaaaagtgaagatatggataaaataataggattaaccacaggtgcagatgat
tatataacaaagccttttaatcccttagaacttttagccagagttaaatctcagttgaga
agatatataaagcttaataattcaaatggaaatgaaaatgaagatattgttactatagag
gatataactataaatgtagcaactcatgaggttaaaattggagatcagccagttaggctt
acaccaagagaatttgatattttagagctactggctagaaatagaggagtagtgtttagt
atagaaaagatatatgaattagtatggaaagaagaatttttagactctaataatacagta
atggttcatataagaaaattaagagaaaaaatagaacaaaatcctagaaatccaagatat
ataaaaacagtttggggagttgggtataaggttgaaaaatag
DBGET
integrated database retrieval system
