Clostridium botulinum A ATCC 3502: CBO0209
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Entry
CBO0209 CDS
T00533
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBO0209 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO0209 (nth)
Enzymes [BR:
cbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CBO0209 (nth)
DNA repair and recombination proteins [BR:
cbo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CBO0209 (nth)
Prokaryotic type
CBO0209 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
RLAN
DUF3349
DUF2400
Cyclase
HHH_8
BACK
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
CAL81761
UniProt:
A5HYA2
LinkDB
All DBs
Position
247284..247925
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AA seq
213 aa
AA seq
DB search
MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEITKELFKEYST
PKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFGSQVPNDFNDLTSLPGVGRK
TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQAIPKELWILMHHVLI
FHGRRCCVARKPKCEECTIKKYCKYYNEEIKPS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
ttgaataatcatgaaataaaaaatgttatagatatattagtagacacatatcctgatgct
aattgtgaattagaacacagaaatccttttgaactgttaatagctacagtcttgtctgct
caaactacagataaaaaagtaaatgagataacaaaggaactatttaaagaatattctact
cctaaggatttcttaaaattaacaagggaagaattagaagagaaaattaaaaaaataggt
ttatatagaaataaatctaagaatatattattgctttgtaaagagttagaagagaagttt
ggaagtcaagttcctaatgatttcaatgatctaacttcactaccaggagtaggtagaaaa
actgctaacgtggttttagccaatgcttttaaagtacctactatagcagtagatacccat
gtttttagagtatctaacagaataggattagtagatgctagtaatgtactaaaaacggaa
gagcagttgcagcaagctataccaaaggaactatggatattaatgcatcatgtgttaata
tttcatggaagaagatgttgcgtagctagaaaacctaaatgtgaagaatgtactataaaa
aaatattgcaaatattataatgaagaaattaaaccatcttaa
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