KEGG   Calonectris borealis (Cory's shearwater): 142074141
Entry
142074141         CDS       T11211                                 
Name
(RefSeq) class II histocompatibility antigen, B-L beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor04145  Phagosome
cbor04514  Cell adhesion molecules
cbor04672  Intestinal immune network for IgA production
cbor05164  Influenza A
cbor05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    142074141
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    142074141
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    142074141
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    142074141
   05168 Herpes simplex virus 1 infection
    142074141
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbor04147]
    142074141
Exosome [BR:cbor04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142074141
  Exosomal proteins of epithelial cells
   142074141
  Exosomal proteins of breast milk
   142074141
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 ig C2-set_2 Ig_2 Psg1 I-set Marek_A C2-set_3 Cna_B
Other DBs
NCBI-GeneID: 142074141
NCBI-ProteinID: XP_074990715
LinkDB
Position
33:complement(214437..222130)
AA seq 260 aa
METGRVLGAGAMLVAVVVLGAHLAHGEETSAVFQELSEGECQYFNGTERVRFVQRYLHNR
QQLVHFDSDVGHYVADSPLGESIAKYWNSQPDLLEQERAAVDTFCRHNYEVSNPFIVERR
VQPKVRVSPMQSSSLPQTDRLVCYVTGFYPAEIEVKWFKNGQEETERVVSTDVIQNGDWT
YQVLVMLETTPQRGETYMCQVEHVSLQHPLTQLWEVQSDGARSKMLTGVGGFVLGLIFLA
LGLFLYMRKKGASFPRLQGS
NT seq 783 nt   +upstreamnt  +downstreamnt
atggagactggtcgtgtcctgggagctggggccatgctggtggcagtggtggtgctggga
gcccacctggctcatggggaggagacctcagcggttttccaggagctgtctgagggggag
tgtcagtacttcaacggcaccgagcgggtgaggtttgtgcagaggtacctccacaaccgg
cagcagttggtgcacttcgacagcgatgtggggcactatgtggctgacagcccgctgggc
gagtctattgccaagtactggaacagccagccggacttactggagcaggaacgggctgca
gtggacaccttctgccggcacaactacgaggtgtcgaaccctttcatcgtggagaggaga
gttcagcccaaggtgagggtctcccccatgcagtcgagctccctgccccagaccgacagg
ctggtttgctacgtgacggggttttaccccgcggagattgaggtgaagtggttcaagaac
gggcaggaggagacggagcgcgtggtgtccacggacgtgatccagaacggagactggacc
taccaggtgctggtgatgctggagaccaccccgcagcgcggggagacctacatgtgccag
gtggagcacgtcagcctgcagcaccccctcacccagctctgggaggtgcagtcggacggc
gccaggagcaagatgctcacgggggtggggggcttcgtgctggggctgatcttcctggca
ctggggctcttcctctacatgcgcaagaagggggcttcgttccccaggctgcagggctcc
tga

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