Calonectris borealis (Cory's shearwater): 142074403
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Entry
142074403 CDS
T11211
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04270
Vascular smooth muscle contraction
cbor04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
142074403 (ARHGEF1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
142074403 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142074403 (ARHGEF1)
Membrane trafficking [BR:
cbor04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
142074403 (ARHGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
Motif
Other DBs
NCBI-GeneID:
142074403
NCBI-ProteinID:
XP_074991105
LinkDB
All DBs
Position
35
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AA seq
1088 aa
AA seq
DB search
MEPEEAFNGSPAAGARGAGGSVVAIIGAEDEDFENDIEPNPDDQNSLFQSLELVRQHPAY
LMAFLQHVVLQFDSCPVLCYLHVDMLRRMNPKEGKKQFLEFCHMFLDKAGLLRVPVPHQV
QFELDRTRPELLSDEVQRRYLQEIQAFQEPEISRQLEDFRSKRLMGMTPGEQELTELESY
RTRDHGIREAKEKQLAEVLLARLEEMHLTISSDEEKSSAIFGAIVTYMKYLGVKTKLGDG
KKSKSNFFRKKISGSKKADELQAKSRKGFSLPGAALWGRDAHNADFRQSKVPEGEAEKAP
HPERRGPKAAERTDGGAARPRGGAAGTPDPPSVAVTINPPPGEGAEGDPGSDPPGSSELG
DAPPRGLCPTEPPAGEQHPTEEGAENERRRIRLPGKLGRSESLRTYERKRSQRGSAKGKQ
PRSRSDVDLQAAARATRPEEGPAPPPGRRRPTLEPGGPGGGEPPQSFLPTQSEETEPRVA
ELELEPPPWRQLAAPDALLRLKKSEVKRQEVINELFLTEHAHVRMLRVLLEVFYQPMLRE
AFFDEHELSNIFPSLEDLVEVHTLFLDSLKKLREESGYVISEIGDVLLARFEGTEGSWFQ
KISARFCSRQSFALEQLKAKQRKDTRFSQFIQEAESQPRCRRLQLKDIIPTEMQRLTKYP
LLLHNITKCTEAAGERAKVEQAAECCRQILNHVNQEVRDMENLMKLKDYQRRLDLSNLKQ
SMDPLLSEFKNSDITKRNLVHEGPLTWRVTRDKAVDVHVLLLDDLLVLLQRQEERLVLRC
HSRTITPTPDGKQMLSPIIKLSSAMTREVATDHKAFYVIISWENGAQIYELVAQTVSERK
NWCAMISETAGSLKLPGSHRAKTSRVGQSPHSPIYGYREPLLSSSENGGSLKEPLPLDER
EKDGAVEGTEFEGSPEKREAERALAELLALRRPPRPGGEGGLAAAALGRVSALKQLLPGL
TPAAGDGDGAASPPEDTWGGPSPAPPEEERRDAGDGAESEGEGRGQRPEGGAAGGTPNGP
RSPQWGSRLPEAGGPVPPLALPPQQAAWLGDELQGLEETLQRLKEIEEHYWQLQEFLAKR
SSTGCLFT
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggagccggaggaggcctttaacgggagcccagcggcgggcgctcgtggtgccggtggc
tcggtcgtggccatcatcggcgccgaggacgaggactttgagaatgacattgagccgaac
cccgacgaccagaacagcctgttccagagcctggagctggtccggcagcacccggcctat
ctcatggccttcctgcagcacgtcgtcctccagtttgactcctgccccgtgctctgctac
ctgcacgtggacatgctgcgcaggatgaaccccaaggagggcaagaagcagttcctggag
ttctgccacatgttcctggacaaggcggggctgctgcgggtgcccgtcccccaccaggtg
cagttcgaactggatcggacgcgccccgagctgctgtcggacgaggtgcagcgccggtac
ctgcaggagatccaggccttccaggagcccgagatctcccggcagctggaggacttcagg
tccaagcggctgatggggatgacgccgggggagcaggagctgacggagctggagtcctac
cgcacccgggaccacggcatccgcgaggccaaggagaagcagctggcggaggtgctgctg
gcccgcctggaggagatgcacctcaccatttcttccgacgaggagaaaagctccgccatc
ttcggcgccatcgtaacctacatgaagtacctgggggttaaaaccaaactgggcgatggc
aagaaatccaagtccaactttttccgcaaaaagatttcggggagcaagaaggcggacgaa
ctgcaggcgaagtcgcggaagggcttcagcctgccgggggcagccctctggggccgggac
gcccacaatgccgatttcaggcaaagcaaagtccctgagggcgaagccgaaaaggcgccg
caccccgagaggaggggcccgaaggccgccgagaggacggacgggggggcggcgcggccc
agagggggggcagccgggacccccgatccccccagcgtggccgtcaccatcaaccccccg
ccgggggagggcgctgagggcgacccaggctcagaccccccgggctcctcggagctggga
gacgcccccccgcgaggcctctgccccacggagccccccgccggcgagcagcaccccacg
gaggagggggccgagaacgagagaagacggatcaggctgccggggaagctggggcgctcg
gagagcctgcgcacgtacgagcggaagcgttcccagcgcggctcggccaagggcaagcag
ccgcgctcccgcagcgacgtcgacctgcaggcggccgcccgcgccacccgcccggaggag
gggcccgcgcccccgcccggccgccgccgacccaccctggagccgggggggccggggggg
ggcgagcccccgcagtcctttctgcctacccagtctgaggagactgagccgcgcgttgcg
gagctggagctggagccgccgccctggcggcagctcgccgcccccgacgccctcctcagg
ctgaagaagagcgaagtcaagcggcaagaagtcatcaacgagctgttcctgacggagcac
gcccacgtgcgcatgctgcgcgtcctgctggaggtcttctaccagcccatgctgcgggag
gccttcttcgacgagcacgagctctccaacatcttccccagcctggaggacctggtggag
gtgcacaccctcttcctcgacagcctgaagaagctgcgtgaggagagcggctacgtcatc
tcggagatcggggacgtgctgctggcgcggttcgagggcacggagggcagctggttccag
aagatctcggcgcgcttctgcagccgccagtccttcgccctggagcagctcaaggccaag
cagcgcaaggacacccgcttcagccagttcatccaggaggcggagagccagccccgctgc
cgccggctgcagctgaaggacatcatccccaccgaaatgcagcgcctcaccaagtacccg
ctgctgctgcacaacatcaccaagtgcaccgaggctgcgggcgagcgggccaaggtggag
caggcggccgagtgctgccgccagatcctgaaccacgtcaaccaggaggtgcgggacatg
gagaacctcatgaagctgaaggactatcagcggcgcctggacctctccaacctgaagcag
agcatggacccgctgctgagcgagttcaagaactcggacatcaccaagaggaacctggtg
cacgaggggccgctgacctggcgcgtcacccgggacaaggccgtggacgtgcacgtgctg
ctgctggacgacctgctggtgctgctgcagcggcaggaggagcggctggtgctgcgctgc
cacagccgcaccatcacgcccacgcccgacggcaagcagatgctgagccccatcatcaag
ctcagctccgccatgactcgcgaggtcgccacagaccacaaggccttttacgtcatcatc
agctgggagaacggggcccagatttacgagctggtggcacagacggtctcggagaggaag
aactggtgcgccatgatcagcgagacggccggctccctcaagctgccggggtcccaccgg
gcgaagacgtcacgcgtggggcagagcccccacagccccatctacggttaccgggagccg
ctgctgagcagctcggagaacggggggtccctgaaggagccgctgcccctggacgagcgc
gagaaggacggggcggtggagggcaccgagttcgaggggagccccgagaagagggaggct
gagcgggcgctggcggagctgctggccctgcggagacccccccggccgggcggcgagggg
ggcctggccgccgccgcgctgggcagagtgtcggcgctgaagcagctgctgccggggctg
acaccggcggcaggggacggtgacggggctgcctccccccctgaggacacctgggggggc
cccagcccggccccccccgaggaggagcggcgggacgcgggtgacggggccgagagcgag
ggcgagggccgcgggcagcgccccgaggggggggctgcagggggcacccccaacggcccc
cgctccccacagtgggggtcccggctgcccgaggcgggggggcccgtgccccccctggcg
ctccccccgcagcaggcggcctggctgggggacgagctgcagggcctggaggagacgctg
cagaggctgaaggaaatcgaggagcattactggcagctgcaggagttcctggccaagcgc
agctccaccggctgcctcttcacatga
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