Calonectris borealis (Cory's shearwater): 142075324
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Entry
142075324 CDS
T11211
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00310
Lysine degradation
cbor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
142075324 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142075324 (PRDM6)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142075324 (PRDM6)
Enzymes [BR:
cbor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
142075324 (PRDM6)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
142075324 (PRDM6)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
142075324 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
142075324
NCBI-ProteinID:
XP_074992618
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All DBs
Position
Z:20314466..20390629
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AA seq
573 aa
AA seq
DB search
MLKPSDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGALAQLQPPERAEPPADSLRQRPA
SLSSAASSSSSSTPSSSSTSSCVAAAAASLAGLTSLPVTQLPVFGPLQSCEPPAGGAPAP
LQGKDLCGAGSGGSQCGERAAARFRCTAEELDYYLYGQQRMDIIPLNQHTSDPNNRCDMC
ADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGI
CAAQRIQQGTWIGPFQGVLLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSW
MRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQD
ENLNVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSIVFPQTPCSRNFSLLDKSGSIESG
FNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQ
CGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERC
ERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccagcgaccccggcggatctgcgttcctgaaggtggatcccgcctatctg
cagcactggcagcagcttttcccgcagagcagccagctgaagagcagcggtgccctcgcc
cagctccagccgcccgagagagccgagcctccggctgacagcctccgccagcgcccggcc
tccctctcctccgccgcctcctcctcctcctcatccactccgtcttcctcctccacctcc
tcctgcgtcgccgcggctgccgcttccctggccggcctgacctccctgcctgtgacccag
ctcccggtcttcggaccgctgcagagctgcgagcccccggccgggggagcgcccgctccc
ctgcagggcaaggacttgtgcggggccggcagcggcggcagccagtgcggtgagcgcgct
gctgctcggttccggtgcacggccgaggagctggactactacctgtacgggcagcagcgc
atggacatcatccccttgaaccagcataccagtgaccccaacaaccgatgtgacatgtgt
gctgataaccgcaacggcgagtgccccatgcacgggcccctccactccttgcgccgtctg
gtgggtaccagcagtgctgccgcagcagcccctccacctgagatcccagagtggctccgg
gacctgccccgggaagtgtgtctgtgcaccagcacagtgcctggcctggcctacggcatt
tgtgccgcgcagcggatccagcagggcacctggattgggcccttccagggagtcctgctc
ttgccagagaaagttcaagcaggagccatcaggaacactcagcatctctgggaaatatat
gaccaagatgggacactgcagcactttattgatggtggagaacccagtaagtcaagctgg
atgaggtatatccgatgtgcaaggcactgcggggagcagaacttaacagtggttcagtac
aggtcaaatatattctacagggcttgtatagatatccccaggggcaccgagctgttggtg
tggtacaatgacagctacacatctttctttggaatccctctccagtgcattgcacaagat
gaaaatttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacag
ccatttaataaaagtagcaaactatcccctgccactcctcagcgatccatagtatttcca
cagactccgtgtagcagaaatttttctctcctggataagtctgggtccatcgagtcagga
tttaaccagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaa
ctaaattctgagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttc
acccagcggatcctcttacagatgcatgtgtgtacgcagaatcctgacaggccctaccag
tgtggtcactgctcccagtctttctcccaaccttcagagctgaggaaccacgtagttacg
cactccagcgacaggcctttcaagtgtggctactgtggtcgtgcctttgctggtgccaca
acactcaacaatcacatccggacacacactggggaaaagcccttcaagtgcgagaggtgt
gagaggagcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgc
aagccaataacagagagcacagaatcaattgaagtggattaa
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