Calonectris borealis (Cory's shearwater): 142075939
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Entry
142075939 CDS
T11211
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142075939 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142075939 (C9orf72)
Membrane trafficking [BR:
cbor04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
142075939 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
142075939
NCBI-ProteinID:
XP_074994204
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Position
Z:complement(13633443..13650577)
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AA seq
481 aa
AA seq
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MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTKQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDILHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgcagttgctaaaacagagatctctttgaat
ggcgagtcgcctttattagctgccacttttgcttactgggacaatattcttggcccccga
gtgcggcatatctgggccccaaagaccaaacaggtgcttctcagtgatggtgaaataact
tttcttgctaaccacaccctcaacggagaaatacttcggaatgcagaaagcggtgcaata
gatgtgaagttcttcgtcttggcagaaaaaagggtaatcatcgtgtcattaatctttgat
ggaaactggaatggagacagaagcacatatggactatcaattatacttccacaaagtgaa
cttggcttctacctgccgcttcacagagtgtgcgtggataggttaacacatattataagg
aaaggaagaatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
ggcacggagagaatggaggatcagggtcagagcattattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaaatcacacagtgttccagaagaaatagat
ataagtgacacggtgctaaatgatgatgacattggggatagttgccatgaaggctttctt
ctcaatgcaattagttcacacctgcagacctgtggttgttctgtagttgtaggaagcagc
gcagaaaaagttaataagattgtgagaacattgtgtctgtttcttacgccatcagaacgg
aagtgttccagactctgtagaaatgagtcgtctttcaaatacgagtcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgtcaagtaatgtat
gccccatatcctactacacatatagatgtagatgtcaatacagtgaagcagatgccccct
tgtcatgaacacatctataatcaacgacgatatatgagatccgagctgacagcattttgg
agagctaattcagatgaagaaatgtctcaagatcatattatccacacagatgagagtttc
acacctgatttaaatgtctttcaagatatcctgcatcgagatacattagtaaaagccttc
ctggatcagatctttcatctgaagcctggcttgtctctaaggagtactttccttgcacaa
tttctgctagtccttcacagaaaagccttaactttaataaaatacatagaagatgacacg
caaaaagggaaaaaaccttttaagtctcttcgtagcttaaagatagatcttgacttaaca
gcagagggcgatcttaacataataatggctttggctgagaagattaaaccaggtctacat
tcctttatctttgggaggccgttctacaccagcgtacaagaacgtgatatgctcatgacg
ttttaa
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