Calonectris borealis (Cory's shearwater): 142080687
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Entry
142080687 CDS
T11211
Symbol
MTR
Name
(RefSeq) methionine synthase isoform X1
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00270
Cysteine and methionine metabolism
cbor00450
Selenocompound metabolism
cbor00670
One carbon pool by folate
cbor01100
Metabolic pathways
cbor01230
Biosynthesis of amino acids
cbor04980
Cobalamin transport and metabolism
cbor04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
142080687 (MTR)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
142080687 (MTR)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
142080687 (MTR)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
142080687 (MTR)
04980 Cobalamin transport and metabolism
142080687 (MTR)
Enzymes [BR:
cbor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
142080687 (MTR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
IPT
NPR1_like_C
Motif
Other DBs
NCBI-GeneID:
142080687
NCBI-ProteinID:
XP_075002629
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All DBs
Position
3:85483898..85536312
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AA seq
1265 aa
AA seq
DB search
MAPTGPAGAHPPVYPQKRMEDEIESVLQERIMVLDGGMGTMIQQHALSEEDFRGHEFKDH
SRPLKGNNDLLSITQPDIICDIHKEYLLSGADIIETNTFSSTRVAQADYGLEHLAYRLNR
VSAQVARKAADDVTAQTGIRRYVAGAMGPTNRTLSVSPSVERPDYRNITFDELVEAYKEQ
AKGLLDGGVDILLVETIFDTANAKAAIFALQMLFEEEYAPRPIFISGTIVDKSGRTLSGQ
TGEAFVISVSHSKPLCIGLNCALGAVEMRPFIETIGKCTTAYIICYPNAGLPNTFGGYDE
TPEVTAKHIKNFALDGLVNIVGGCCGTTPAHIRKIAEAVKLCKPRVPPSLSQGYMLLSGL
EPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSVAKLQVEMGAQVLDINMDDG
MLDGPAAMTRFCNLISSEPDIAKVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGEED
FLAKARKVKLYGAAVVVMAFDEMGQATETETKITVCSRAYHLLVEKVHFNPNDIILDPNI
LTIGTGMEEHNLYAMNFINATKTIKETLPGARISGGLSNLSFSFRGMDAIREAMHGVFLY
HAIKYGMDMGIVNAGNLPVYDDIHKELLQLCENLIWNKDPDATEKLLHYAQNHAQGGRKV
VQTDEWRKSSVEERLEHALIKGIEKYVTADTEEARLNQQKYPRPLNVIEGPLMNGMKIVG
DLFGAGKMFLPQVIKSARVMKKAVGHLIPYMEKEREERRAERGSIEEEDPYHGTIVLATV
KGDVHDIGKNIVAVVLGCNNFRVIDLGVMTPCDKILRAAVENKADIIGLSGLITPSLDEM
IFVAKEMERLAIKIPLLIGGATTSKTHTAVKIAPRYSAPVIHVLDASKSVVVCSQLLDES
VKDDFFEEILEEYEEIRQEHYESLKERRYLSLQQARRKGFHNDWLSGHKPVKPKFIGTKV
FEDYDLNRLVEYIDWKPFFDVWQLRGKYPNRGFPKVFNDKTVGEEAKRVYNDAQNLLKTL
INQKKLQARGVVGFWPAQSVQDDIHLYAVEEAVGSSEPIAKFYGLRQQAEKDSACTDPYY
CLSDFIAPLDSGICDYLGLFAVACFGVDELCNEFRKQDDEYNIIMVKALGDRLAEAFAEE
LHERVRREFWAYCSTEQLDLSDLRRIKYEGIRPAPGYPSQPDHTEKLTMWKLANIKETTG
IGLTESLAMIPASAVSGLYFSSPKSKYFAVGKICKDQVEDYARRKSLSVAEVEKWLGPIL
GYDTE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccacggggccggcgggcgcccacccgccggtatatccccagaaaaggatggaa
gatgaaattgaatcagttctgcaggagcggataatggttttggacggaggcatgggtacc
atgatccagcaacatgccctgtcagaagaggatttccgagggcatgaatttaaagatcat
tccaggcctttgaaaggcaacaatgaccttctcagtataactcaacctgatataatctgt
gacatacacaaggaatacttgctgtcaggcgctgacataattgaaactaacactttcagc
agtacacgagttgcacaagctgactatggccttgagcatttggcatatcggttaaacaga
gtctctgcacaggtggccagaaaagcagcagatgatgtaactgctcagacaggaattagg
agatatgttgctggagccatgggtccaacaaataggacactctctgtgtcaccatctgtg
gagagaccagattacaggaacataacttttgatgaactggttgaagcgtataaggaacaa
gccaaaggacttttggatggaggagttgatatattgttagtggagaccatatttgataca
gccaatgccaaggcagctatttttgcacttcagatgttgtttgaggaagagtatgctccc
cgacccatatttatttctggaaccattgtggataagagtgggcgtactctctcaggccag
acaggagaggcatttgtcattagtgtttcccacagtaagccactttgtattggcttaaat
tgtgctttaggggcagttgaaatgcgaccattcattgaaacaattggaaaatgtacaaca
gcctacatcatctgttaccccaacgcaggtcttcccaatacttttggtggttatgatgaa
actccagaagtgactgccaagcatataaagaattttgctttggatggtttggtcaacata
gttggaggttgctgtggtactacaccagcacatatcaggaaaattgccgaagctgtgaaa
ctatgtaagcctcgcgttccaccctctctctctcaaggatacatgctgttgtcaggtctg
gagccattcaggattgggccatacaccaacttcgttaatattggtgaacgctgcaatgtt
gcaggatcacggaagtttgctaaactcatcatggcaggcaactatgaagaagccctgagt
gtagccaaattgcaagttgagatgggggcccaggttcttgacatcaatatggatgatggg
atgctggatggccctgctgcaatgaccagattttgtaacttgatttcttcagaacctgat
attgcaaaggtgccgttatgcattgactcctccaacttttcagtgattgaagcaggtttg
aaatgttgccaagggaaatgcattgtaaacagcatcagtctgaaggaaggtgaggaagac
tttttggcgaaagcaaggaaagttaagttgtatggagcagctgtggttgtcatggctttt
gatgaaatggggcaggcaacagaaacagaaaccaagattacagtctgttccagagcttat
cacctccttgtagaaaaagtgcacttcaatccaaatgatataatactcgaccctaacatt
ttgaccataggaactggaatggaagaacataacctgtatgccatgaattttatcaatgct
actaaaaccataaaagaaacactgccgggagccaggataagtggaggtctttccaatctc
tctttctcttttcgaggaatggatgccattcgagaagcaatgcatggggtgttcctttac
catgcgattaagtatggtatggacatgggaattgtgaatgctgggaatctgccagtgtat
gatgatatccacaaggaattgctacagctgtgtgagaatctaatctggaacaaagatcct
gatgcgacagagaaacttttacattatgctcagaatcatgcacaaggaggaagaaaagtt
gtacagaccgatgagtggcggaaaagctctgtggaggaaaggctggaacatgctcttata
aagggcattgagaagtatgtcactgcagatacagaagaagcaagattaaatcagcaaaaa
tatcctagacctctaaatgtaattgaagggcctttgatgaatggcatgaaaattgttggc
gatctttttggtgctggaaagatgtttctgcctcaggtgataaagtctgctcgagttatg
aagaaggcagttggccaccttattccctatatggaaaaagaaagagaggaaaggagagcg
gaacgaggcagcatagaggaagaggatccttatcatggtacaatagtactagcaactgtg
aaaggagacgtacatgatatcggcaagaacattgtggcagtcgttctgggctgcaacaac
ttcagagttattgatttaggagtcatgactccatgtgataagatattgagagctgctgtt
gagaacaaagcagatataattggcctatctggtctcatcaccccttctttggatgaaatg
atttttgtcgccaaggaaatggagagactggcgataaagattcctttgctgattggagga
gcaactacttctaaaacacacacagctgttaaaattgccccacgatatagcgcacctgta
attcatgtcctggatgcatccaagagtgttgtggtttgctcccagctcttagacgaaagt
gtaaaggatgatttctttgaagaaatattagaggaatatgaagaaattagacaagaacac
tatgagtctctcaaggaaagaagatacttgtctctacagcaagctagaagaaaaggtttc
cataatgactggttatcaggccataaaccagttaaaccaaaattcatcggcacaaaagtc
tttgaagattatgacctgaataggctggtagaatacattgactggaagcctttctttgat
gtctggcaacttaggggaaagtatcccaaccggggtttccctaaagtctttaatgataaa
actgtaggtgaagaagcaaagagagtttataatgatgctcaaaatctactgaaaacgttg
attaatcaaaagaaattacaagccagaggtgtggttgggttctggccagctcaaagtgtt
caggatgatatccatttatatgctgtagaagaggcagtgggatcttcggaaccaatagca
aaattttatggcttgaggcaacaggctgaaaaggactctgcctgcacagatccatattac
tgcctctctgacttcatcgcaccactggattctggcatttgtgactacttaggcctgttt
gctgtggcctgctttggtgtagatgagttatgcaatgaatttaggaaacaggatgatgaa
tacaacatcataatggtaaaggctcttggcgatcggttggcagaggcatttgctgaggag
ctccatgaaagggttcgaagggaattctgggcttactgtagtactgagcagctagatctc
tctgacctacgcagaattaaatatgagggaattcgccctgcccctggatatccaagccag
cctgaccatacagaaaaactcaccatgtggaaacttgcaaacattaaggaaacaacagga
attggtttaactgaatcactagcaatgatacctgcttctgcagtttctggcctctacttt
tccagtcccaaatccaaatattttgctgttggcaagatatgtaaagatcaggttgaagat
tatgcacggagaaaaagtttgtctgtggcagaggtggagaaatggctgggacccattttg
ggatatgatactgaataa
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