Calonectris borealis (Cory's shearwater): 142081845
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Entry
142081845 CDS
T11211
Symbol
LEMD3
Name
(RefSeq) inner nuclear membrane protein Man1 isoform X1
KO
K19410
inner nuclear membrane protein Man1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
142081845 (LEMD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142081845 (LEMD3)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
142081845 (LEMD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
142081845
NCBI-ProteinID:
XP_075005186
LinkDB
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Position
1:38394448..38445026
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AA seq
914 aa
AA seq
DB search
MATAAQLTDEELFSELRRFGFSPGPVTESTRPVYLKKLKKLREDERAGARSGANKTRNSN
NNNTGAGAAPGGGGPGRAAPGVGARLVGAEHPYLPGAAAGSSRSRAAPPAGGGKVLLGFS
SDESDVETSPRSQAGAGSRRERASPLFRGLRPAAPHGACGVSNSSPPEEAARRKPNAWWG
AAARRPTAAQGVREPGDGDEEGGEEDDEEEEEEESEQQRWKNRTVNGNRLLSYGGSRDKY
SDSEEEEAAAGPRAKQQVPKEESAVRRPRRSLSKSPAPFITSKCAAAGAGVMETGQERAG
GGCGAGVVTNDRAAAEAAAVGSLDRGRNREEEEAAAAGGGGCENLDSSPPSPRFRIGLPK
KSPTALLLPPPLTDVDSSKITDPPGTIRKATNNHVLSGAAGSYNVESRIYSATNSLPPGG
TTSSLRLNHSNHTGSNHTYLKNTYKKNLSEPEEELLQQFKREEVSTTGGFSAHYLSMFLL
TAACLFFLILGFTYLRMRGSGVAEDVGVNIKNPFSEELQKIKEDEISLMMNSLYALHDKL
AQVAGEHECGSSIQRNLTVQEAAAYLKNLDPEYESVLNTALQWVLNSGEDVGIKCLSNDP
DEMDVTNVTDVKYLESTSPKMSFRCRFRRAFVNVTHRLSILLLGIAMVWGVLHYMKYRWA
KEEEETRQMYDMVVKIIDVLRSHSEACSENKDLQSYMPILHVRDSLIPPQDRRKMKKVWN
RAVDFLAANESRVRTETRRLGGAEFLVWKWMQPSAACDKILVIPSKVWQGQAFHLDRRNS
PPNSLTPCLKIRNMFDPVMEIGDHWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVK
CLSPEYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSMSH
LRLRTGTTNSQGSS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggccgcgcagctcacggacgaggagctcttctcggagctgaggcgcttcggc
ttctccccggggccggtcaccgagagcacccggcccgtctacctgaagaagctgaagaag
ctgcgcgaggatgagcgggctggggcccgcagcggcgccaacaagacccggaacagcaac
aacaataacacgggggccggagcggcgccgggcggcggcggccccgggcgggcggccccg
ggcgtgggcgcgcggctggtcggcgccgagcacccgtacctccccggggctgccgccggg
agcagccggagccgcgcagcaccccctgccgggggcggcaaagtgctgctgggcttcagc
tcggacgagtcggatgtggaaaccagtccccggagccaggccggcgccggcagcaggagg
gaacgggcttcacccctcttccgcggcctgaggcccgccgccccccacggcgcctgcggc
gtgagtaacagctcccccccggaggaggcggccaggcggaagcccaacgcctggtggggg
gcggcggccaggagaccgacggcggctcagggtgtgagggagcccggggacggcgacgag
gaaggaggggaggaggacgacgaagaggaggaggaggaggagagcgagcagcaacggtgg
aagaaccggaccgtgaacggtaaccggctcctctcctacggcggcagcagggacaagtat
tctgactcggaggaggaggaggcggcggcggggccgagggccaagcagcaggtaccgaag
gaggagtctgcagttcgccggcccagacggagcctcagcaagtctcctgctccattcata
acaagcaaatgcgctgcagccggcgctggcgtgatggagacgggccaagaaagggctggc
ggaggctgtggtgctggtgtagtaacgaatgacagggcggcggcggaggcggctgctgtc
gggagtctagacaggggcagaaatcgggaggaggaggaggcggcggcggcaggaggagga
ggatgtgaaaatctggactctagtcctcccagccccagattccgcattggcctacctaag
aaatcccctacagcattgttgctgccgccaccgctcacagacgtggacagcagtaaaatc
actgaccctccaggcaccattaggaaagcgaccaataatcatgttctcagcggtgctgct
ggtagctataacgttgaatccaggatctattcagctactaatagccttcccccgggtgga
accacctcctcccttagactcaaccactccaatcatacgggttcaaatcatacctacctg
aaaaacacctacaagaagaatctctcagagcccgaggaggagcttctccaacagttcaaa
agagaggaggtatccaccactggaggcttcagtgcacattacctgtccatgttcctctta
actgctgcatgcttgttctttctgatactgggattcacatacctgagaatgagaggttct
ggagtagctgaggatgtgggagtcaacatcaagaatcccttcagtgaagaactacaaaaa
ataaaagaagatgaaataagtctcatgatgaacagcttatatgcacttcatgataaattg
gcacaagtagcaggggaacatgaatgtggcagctctattcaaagaaatcttaccgtccag
gaggcagctgcatatttaaaaaatttagatccagaatatgaaagtgtacttaacacagca
ttacaatgggtcttgaatagtggggaagatgttggcataaagtgtctcagcaatgaccct
gatgagatggatgtcactaatgtgacagatgtgaagtatctggaatccactagtccaaag
atgtctttcaggtgtcgttttcgccgtgcgtttgttaatgtaactcacagattatcaata
ttgcttttgggtatagcaatggtttggggagtcttgcactacatgaaataccgttgggca
aaagaggaagaagaaacaaggcagatgtatgatatggtggtaaaaatcatagatgttcta
agaagtcacagcgaggcatgttctgaaaataaagacttgcagtcttatatgcctatttta
catgtgcgtgactctctaataccacctcaggacaggaggaaaatgaagaaagtctggaat
agagcagttgactttcttgcagcaaatgaatctagagttcgcacagagacacgaaggtta
ggtggtgccgagttcttggtttggaaatggatgcaaccttctgcagcgtgtgacaaaatt
ttagtaataccatcgaaagtatggcaaggccaagcatttcatctagatagaagaaattca
ccaccaaacagcttgacaccatgtctaaagattcgcaatatgtttgatccagttatggaa
ataggtgatcactggcatttagcaattcaagaagcaatcttggagaaatgcagtgataat
gatggaattgttcatattgctgttgacaaaaattcacgtgagggttgtgtatatgtcaag
tgtctctctccagagtatgctggaaaggctttcaaggcattacatggctcttggtttgat
ggaaagctggtaacggtaaaatacctgcgactagatcggtatcatcatcgttttccccag
gctcttacttgtaacactccactgaagccatcaaacaaacacatgaactctatgtcacat
ctgcgtcttcggacaggcacaactaattctcagggaagttcctga
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