Calonectris borealis (Cory's shearwater): 142082708
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Entry
142082708 CDS
T11211
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04620
Toll-like receptor signaling pathway
cbor04621
NOD-like receptor signaling pathway
cbor04622
RIG-I-like receptor signaling pathway
cbor05164
Influenza A
cbor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142082708 (TRAF3)
04621 NOD-like receptor signaling pathway
142082708 (TRAF3)
04622 RIG-I-like receptor signaling pathway
142082708 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
142082708 (TRAF3)
05168 Herpes simplex virus 1 infection
142082708 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
CCDC18_1st
CCDC18_2nd
zf-C3HC4
Cast
MPS2
Sina_ZnF
ATG16
zf-C3HC4_2
CEP104_ZnF
ODF2_N
Rod_CreS
Spc29
NOCA1_mid
zf-RING_UBOX
Tropomyosin
KxDL
Med28
zf-RING_6
DUF1664
HrpB7
SPATA24
BLOC1_2
T4SS_LegC2C7
SNARE
Motif
Other DBs
NCBI-GeneID:
142082708
NCBI-ProteinID:
XP_075007136
UniProt:
A0A7L3Y656
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All DBs
Position
5
Genome browser
AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELSCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaaccccctttatctgtagaaatggtacaacaaagggcc
aatcctgatcgcagtccttcagcatcaatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgctgtggaagataagtataaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgagacctgcatgaatgccttgcta
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgtagaaatgaaaac
aagggctgtaaagaacaactatctttgggtcaattactgatgcatttgaaaactgattgt
cagtttgaagaactctcgtgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgatcatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagtgtagaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcgaaatacaagcctgcta
gagacacagctgagcagacatgatcagatgctgagcgttcatgatattcggctggctgac
atggacctccgattccaagttttagaaactgccagttacaacggagtattaatttggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtcgttgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaagggaacgcacttgtcgttgttttttgtcataatgcgtggagaa
tatgatgcgttgcttccttggccatttaaacagaaagtgactctcatgctaatggatcag
ggaccgtctcgacgccacttaggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gtgctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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