Calonectris borealis (Cory's shearwater): 142083152
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Entry
142083152 CDS
T11211
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04010
MAPK signaling pathway
cbor04120
Ubiquitin mediated proteolysis
cbor04140
Autophagy - animal
cbor04144
Endocytosis
cbor04620
Toll-like receptor signaling pathway
cbor04621
NOD-like receptor signaling pathway
cbor04622
RIG-I-like receptor signaling pathway
cbor05132
Salmonella infection
cbor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142083152 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142083152 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142083152 (TRAF6)
04140 Autophagy - animal
142083152 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142083152 (TRAF6)
04621 NOD-like receptor signaling pathway
142083152 (TRAF6)
04622 RIG-I-like receptor signaling pathway
142083152 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142083152 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
142083152 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142083152 (TRAF6)
04121 Ubiquitin system [BR:
cbor04121
]
142083152 (TRAF6)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142083152 (TRAF6)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
142083152 (TRAF6)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
142083152 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142083152
NCBI-ProteinID:
XP_075008466
LinkDB
All DBs
Position
5:50402906..50425524
Genome browser
AA seq
545 aa
AA seq
DB search
MSLLYSDNSCGARDVESGCCAAMASACSAGAKEDSVSVSSGTGNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGAFQKNHLKEHMTQ
ECPRRQVCCPNCATCMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNTSVTAANPVPFINGLPFEPAL
FSHVSHAAYECNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS
TDGAM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctatatagtgataacagttgtggagcccgagacgtggaaagtggctgctgt
gcagccatggccagcgcctgcagcgctggagcgaaagaagacagcgtaagcgtcagcagc
gggactggaaaccctccaagttctttcacagaggaaacacaaggatatgatgtggagttt
gatccacccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgggaagca
gtgcagacaccatgtggacaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcaggtcacaaatgtccagtagacaacgaaattctgctcgaaaatcaactttttcctgac
aacttcgctaaacgggaaatcctttcattaacggttaagtgtcccaacaagggctgcagt
atgaagatggagctgaggcatttagaggaccaccagttgcagtgtgatttttccactgtg
gaatgcccacagtgccaaggagccttccagaagaaccatctgaaagagcacatgacacag
gagtgtccgaggcgtcaagtctgttgtccaaactgtgccacatgtatggcctatgaagat
aaagagcttcatgaccaaacctgcccactcgccaatgtattttgtgaatattgcaacaca
gtgctcatcagagagcagatgcctaaccattatgacaacgattgtcctactgccccagtg
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaacgaactggcgcga
catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaatact
agtgttactgctgcaaatcccgtacccttcatcaatggcctaccctttgagcctgccctc
ttctcgcacgtgtcacatgccgcgtatgagtgtaatcccgaagttgaaaactttaaagaa
accattcagcagttggaaggtcgtctggtaaggcaagatcaccaaatcagagaactcatt
gctaaaatggagactcagaacactcacatggcagaacttaaacgtactatccgaaatttg
gagggaaagattactgaaatggaggcacagcaatgtaacggcatttatatctggaagatt
gagaacttcagtggacttcagaaagcccaggaagaagagagacctgttgtgatgcacagt
cctggcttctatactggaaagcctggctacaagctgtgcttgcgcctgcatatccaatta
ccaaatgctcagcgttgtgctaattttatctctctgtttgtccacactatgcaaggagaa
tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa
tcggagggccctgaaaggcagaatcatgaagaagtaatggaagccaagccagagttacta
gccttccagagaccaacaattcaccgcaacccaaaaggttttggttatgtgactttcatg
cacctgcaaaccctgaaacaaagaacctttgtaaaggatgatacccttctggtgcgctgc
gaagttctaacgcgtctagatttaaacagtctccgcagagaaggatttcaagctcgcagt
actgatggagctatgtag
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