KEGG   Calonectris borealis (Cory's shearwater): 142084384
Entry
142084384         CDS       T11211                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142084384 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbor03041]
    142084384 (SMNDC1)
Spliceosome [BR:cbor03041]
 Complex A
  U2 snRNP components
   U2 related factors
    142084384 (SMNDC1)
 Complex B
    142084384 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    142084384 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 142084384
NCBI-ProteinID: XP_075011128
LinkDB
Position
7:complement(32692155..32708731)
AA seq 247 aa
MRGSFLKMWMSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLS
TQPSETLASSDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGY
GNAEVTPLFNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQER
EDQKVKWQQFNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYN
VRHLMPQ
NT seq 744 nt   +upstreamnt  +downstreamnt
atgcgcggtagttttctaaagatgtggatgtcagaagacctggcaaagcagttagctagc
tacaaagctcagcttcagcaagttgaggctgccttatctgggaatgcagaaaatgaagat
ttactaaaactgaagaaagacttacaggaagtcatagaattaaccaaagatctcctttca
acacaaccttcagaaactcttgcaagttctgacagttctgcttctgctctgcccagtcac
tcctggaaggttggggataggtgtatggcgatatggagtgaggatggacagtgttatgaa
gctgagattgaagaaatagatgaggagaatggaacagctgcggtcacatttgctgggtat
ggcaatgccgaagttacacctctgttcaacctcaagcctgtggaagagggaagaaaagca
aaagaggacagtggcaacaaacccatgtccaaaaaagagatgatagcacagcaacgagag
tataaaaagaagaaagctttgaaaaaagctcagagaattaaagaacttgaacaggaacga
gaggaccagaaagtcaagtggcaacagtttaacaacagagcctattctaaaaacaaaaaa
ggccaggtaaagaggagtatttttgcttcccctgagagcgtaactggcaaggttggagtt
ggaacatgcggaattgcagacaaacctatgacacagtatcaagatacctctaaatacaat
gtcaggcatttgatgcctcagtaa

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