Calonectris borealis (Cory's shearwater): 142086393
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Entry
142086393 CDS
T11211
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142086393 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142086393 (NUP210)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142086393 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_1st
Ig_NUP210_9th
Ig_NUP210_14th
Ig_NUP210_6th
Ig_NUP210_16th
Big_2
NUP210_Ig
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
142086393
NCBI-ProteinID:
XP_075015525
LinkDB
All DBs
Position
10:complement(23223672..23293279)
Genome browser
AA seq
1885 aa
AA seq
DB search
MAPPAPQALSLLLLLLSLHLTASSKLNIPKVLLPFTRGTRVNFTLEASGGCYRWSSTRPE
VASIELADQDERQCSQKAIVQARSSQPTRLTSIIFAEDIMTGQVLRCDAIVDIIHGIQIV
STTRELYLEDSPLELKIQALDSEGNTFSTLAGLVFDWTIVKDTEADSASDSYNALRILKF
LESTYIPPSYISEMEKVAKQGDTILVSGMKTGSSKLKARIQESVYKHVHPAEVRLLILEN
ILLNPAYDIYLLVGTSIQYRVQKIRQGKITELMMPSDQYELQLQNNVLGPEGDLSWPVAK
LDQATSVVTALQQGQTNLILGHKSIRMQGVSRLPNSTIYVVNPGYLGFTVHPGDRWVLET
GRLYEITIEVYDKSSNKVYLSDSIRINTKLSKEYFEVLKSSLNGSYHYVKAIKKGQTIID
AALTSVVDQDGGVHTLPVPVRNQQDVEIYVPIVLSPSILTFPWQPKAGVYQYTIQAHGGS
GNFSWSYSNQAVATVTVKGLMTTGSDIGVSVIQAIDVQNPLHYGEMKVYVTEPSGMEFTP
CQVEARVGQTLELPLRINGLTNVETGETVPLSDCSHFDLVVEVEKRGVFRPLQGRLKPTA
DFCSGVRVKAETQGYTTLIVSYTHGHVHLSASITIAAYLPLKTIDPPSVALVTLGSSKDM
LFEGGPRPWVQEPSKFFRNITAEDAESIGLSLFGPPTSRNNIQHWVRVSCKSLGEQVIAL
TVGNNPTITNPFPAVEPAVVKFICAVPSRLTLTPVYGSPQLDLSCPLLQQNKQVVPVSNY
RNPVLDLAAYDQQGSKFDNFSSLSVIWESTKISLANIEPDMPMEMTLKEDGSGQKKMHGL
QTVLVHHESGTTAISATATGYQQSHLKAAKVKIPYEPLLPVSATIELILVEDVKVNPSDV
SIYNHPDVQAELFIKEGSGYFFINTSVANVVRVAHEETQGIALVHPLLPGSVTVMIHDLC
LAFPAPAKAEIYVSDIQELYVRVVDKVEIGKTVKAYVRVLDDSKKPFLAKYFAVMDLKLR
AASQIVSLVPLSEALDDHTAAFLVHGMAIGQTSLMATVADKRGQRINSAPQQIEVFPPFR
LLPRKVTLIIGAMIQITSEGGPQPQSNIIFSISDEKIASVNSTGLVRGVAIGNGTVTGVV
QAVDAETGKLVVVSQDKVEVEVVQLTAVRIRAPITRMKTGTQMPVYVMGITSSQTPFSFG
NAVPGLTFHWSVTKRDTLDIKTRHSEASFQLPAKYNFAMDVYGKVKGRTGLKVVVKVLDP
AANQFYNMAKELYDEIQIQVFEKLYLVTPEIEAEQILMSPNSFIKLQTNRDRVASLSYRV
LEGPDKIPVVKIDERGFLNSGSLIGSSTIEVISQESFGINQTIVASVKVYPISYLRISMS
PILHTQNKEALLALPLGVTLTFTVHFHDNSGDTFHSHNSVLNFATNRDDFVQIGKGATNN
TFVIRTVNVGLTLLKVWDAEHSGIADYVPLPVQHAIFPELIDVVVGDVLCLSTSLINQEG
LPGVWSSSLSSVLQVDSKTGVAVARDSGVVTVYYEIPGLLKTYREILINIPQRTTAMHVS
GVKTSLQGVAASKVIVSIGERNKNLKGECLPAQIEAIAELQPQSIINCHLDFNNDAFDFP
ARDIFIAEPGFDAVSGHYICSITMHRLTDKQLKHLSMSKTALRVTASIQGSHFSGEQIST
EVPFNPGFYADQTEMLLSNHYTSSDVKIFGATEILDTLEVKCGSPTVKAFEKEKSYGLPS
YVVYTVSLSDPKVSSQGSLSTTLTVSSPMTDQSITIPVTVIYLTDRTSAPVRHGASLFQH
FLDSYQVMFFTLFALLAGTAVMIIAYHAVFSPKEQHSHPAFTPRTTPQHSHNSFSVSPAL
SFSPQSSSRKTSPSSTLWSTDYGSR
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggctccccccgcgcctcaggcgctgtctcttcttctcctcctcctttccctccacctc
accgcctcctccaagctcaacatccccaaggtgctgctacccttcacccgcggcacccgc
gtcaacttcacgctggaggccagcgggggttgctaccgatggtcctccaccaggccggag
gttgcgagcatagagctggcagatcaggatgagcgccagtgttcacagaaagctattgtc
caggcacggtcctcacagcccacacgtctgacaagtatcatctttgctgaagatataatg
actggacaagtgcttcgttgtgatgctatagttgatataattcatggcatccaaattgtg
tccacaacaagagaactctatcttgaagattcaccactggagctaaaaattcaggctttg
gattctgaaggaaacactttcagcacattggcagggttagtctttgactggacgatagta
aaagacacagaggctgatagcgcctcagattcctacaacgcattacgtatactcaagttc
ttagaatccacttatattccaccttcctatatatcggagatggaaaaagttgcgaagcaa
ggagataccattttggtgtctggaatgaaaacagggagttctaaattaaaagcaagaata
caggaaagcgtctataagcatgtacatcctgcagaagtcagattgcttattttggaaaac
atccttttaaatccagcatatgacatttatcttctggtaggaacgtcaattcagtacaga
gttcagaaaataaggcaagggaagattacagaattaatgatgccgtctgatcagtatgaa
ctgcagctacagaacaacgtacttggtcctgagggagatctgtcttggccggttgccaag
ttggaccaggcaacatcagttgtaactgcattgcagcagggacaaactaacctcatactt
gggcacaagagtattcgcatgcaaggggtttccagactaccaaacagcactatctatgtt
gtaaatcctgggtatttaggttttacagttcatccaggtgacagatgggtcctagaaaca
ggcagactttatgaaattacaattgaagtgtatgataaatcaagcaataaggtgtattta
tctgacagtatcagaattaatacaaagctgtccaaagaatattttgaggtgctgaagtca
tctctgaatggatcatatcattatgtgaaagcaataaagaagggtcagaccatcattgat
gctgcactgacgtcagtagtagatcaggatggaggtgttcatacattaccggttccagtg
cgaaaccagcaagatgttgaaatatatgttcccatagttctttcacccagcattttgacg
tttccttggcagccaaaagcaggagtctaccagtataccatacaggctcatggtggaagt
ggaaatttcagctggtcctattctaaccaggcagttgctacagtgacagtcaaaggatta
atgacaactggaagtgatattggcgtcagtgttattcaggcgattgatgttcagaatccg
ttgcattatggagaaatgaaggtgtacgtaactgaacctagtgggatggagttcacacca
tgtcaagttgaagcacgtgttggccaaacattggagctgcccctgaggattaatggccta
acaaatgttgaaacgggcgagacagtcccactgagcgactgctcacactttgatctagtt
gtggaagtagaaaaacgtggcgtgttcaggccacttcaaggaaggcttaagccaactgct
gatttttgtagtggagtcagagtgaaagctgaaactcaaggatacacaacacttattgtt
agttatacccatggtcatgtccacctcagtgctagcatcaccattgctgcttatctacca
ttaaaaactattgatcctccatctgttgctttagtgactttgggttcctctaaagatatg
ttatttgaaggaggacctagaccatgggtacaagaaccttcaaagttcttcaggaacatt
actgctgaggatgcagaaagtattggtctgtctttatttggaccccctacatctcgaaat
aacatccagcattgggttagagtgtcttgcaaaagcctgggagagcaagttattgcctta
acagttggaaacaaccctacaatcaccaacccttttccagcagttgaacctgctgttgtg
aagttcatctgtgccgtcccttcacgactcactttgactcctgtttatggaagtcctcag
cttgatctctcctgccctttgctgcaacaaaacaagcaagtggttcctgtttcaaattat
cgcaatccagtattggatttggctgcatatgaccaacagggcagtaaatttgataacttc
agttctcttagtgttatctgggaatcaacaaaaatatccttagctaatattgagcctgat
atgccaatggagatgactctgaaagaagatggaagtggtcaaaagaaaatgcatggctta
caaactgttctagttcatcatgagtctggaacaactgccatctctgcaactgcaacagga
taccagcaatcccatctcaaggcagctaaagtaaaaataccgtatgaacctcttttacca
gtgtctgccactattgaactgatactagtggaagatgtaaaagtgaacccttctgatgtc
tccatttacaatcaccctgacgtacaggcagaacttttcatcaaagaaggttctggatat
tttttcattaataccagtgttgcaaatgttgtaagagtggctcatgaggaaactcaaggt
attgctttggtgcatcctctgcttccaggatcagtgactgtaatgattcatgacttgtgt
ttggctttccctgcaccagctaaagctgaaatttatgtatctgatatacaggaactgtat
gtccgagttgttgacaaggtggagattggaaaaacagttaaagcttatgtcagagttctg
gatgactctaagaaaccttttctggctaaatactttgctgtcatggatctaaaactaagg
gcagcgtctcagattgtttcacttgtcccactcagcgaagctcttgatgaccataccgct
gcttttctagtgcatgggatggccattggtcaaaccagtcttatggcaactgttgctgac
aaaagaggacaaagaatcaactctgctccacaacagattgaagtctttcccccatttaga
ctactgccaaggaaagtcaccctaattattggagccatgattcagatcacttcagaagga
ggccctcaacctcaatccaacatcattttctccatcagcgatgagaagattgcatcagtg
aacagcactggacttgtcagaggagtggcgattgggaatggaacagtaacaggggtggtg
caagctgttgatgcagagacagggaagcttgtcgtggtgtctcaggacaaagtggaagtt
gaagtagtacagctgacagctgttagaattcgtgcaccaattacacgaatgaaaactggt
acacagatgccagtttatgtaatgggcatcaccagtagtcagactcctttttcatttggc
aatgcagtgccggggttaacgttccactggtctgtcacaaagagggatactctggatatc
aagacaagacacagtgaggcttcttttcagcttcctgcaaaatacaactttgcaatggat
gtttatggcaaagtaaagggaagaacaggcctgaaagttgttgtgaaggtccttgatcct
gcagccaaccagttttacaacatggcaaaagaactatacgatgaaatccaaattcaggta
tttgaaaaactttatctagtcactccagaaatagaagcagagcagatcttaatgtcgcca
aattcctttattaaacttcagacaaacagggaccgagtggcttcactgagttaccgtgtt
ctggaaggaccagataaaattcctgttgtaaaaatcgatgagagaggtttccttaattct
ggatctttgataggatcatcaacaattgaagtgatttcacaagaatcatttgggatcaac
cagaccattgtagcttctgttaaggtctaccccatctcatacctaagaatctccatgagt
cctattctgcacacgcaaaacaaagaggcattattggctctccccctgggtgtaacactg
acatttacagtccattttcatgataactctggagatacttttcattcgcataattctgtg
ctcaactttgcaacaaacagagatgactttgtacagattgggaaaggagccacaaacaac
acatttgtaatccggactgtaaatgtaggtttgaccttgcttaaagtctgggatgcagaa
cacagtggaattgcagactacgtcccacttcctgtgcaacatgccatttttcctgaactc
atagatgtggtggtgggtgatgtcctctgtttgagtacttcactgataaaccaagaaggc
ctgccaggcgtatggagctcctcattaagtagtgttcttcaagtcgactccaagactggc
gtagcagtggcaagggattctggtgttgtcactgtctattatgagattcctggattactt
aaaacatacagagagatattgattaatatacctcagaggactacagcaatgcatgtaagt
ggagtgaaaacaagcttacaaggagttgcagcctcaaaagtgatagtttcaattggggaa
agaaataaaaatttgaaaggggagtgcttgcctgctcagattgaagccattgctgaatta
caaccacagtccattatcaattgccatctagattttaacaatgatgcgtttgacttccca
gcacgtgatatttttatagcagaacctggatttgatgcagtttcaggacattacatctgt
tccatcacaatgcacaggcttactgacaagcagctgaagcatctcagcatgagtaaaact
gcactcagagttacagcttcgatccaaggcagccacttctctggggagcaaatcagcact
gaggtgccattcaatcctggcttttatgctgaccaaacggaaatgcttttaagtaaccat
tacacaagctctgatgtgaaaatatttggtgccaccgaaattcttgataccctggaggtg
aaatgtgggtcaccaacagtgaaggcatttgagaaagagaaatcctacgggctgcctagt
tacgtagtctacactgttagtctgtctgatccaaaagtttcaagccagggatccttatca
accactctaactgtctctagtcctatgactgaccagtctatcactatcccggtgacagtg
atttacttgactgacagaaccagtgcaccagtgagacatggagccagtctattccagcac
ttccttgattcttatcaagtaatgttcttcacgctttttgcactattagcagggacagct
gttatgattatagcctatcatgcagtcttctcaccgaaagaacagcacagtcatccagca
tttaccccaaggacaactcctcaacacagccataacagtttctctgtatcacctgcgctt
tccttcagtcctcagtcctcaagcaggaaaacaagcccatcatccacgctctggagcact
gattatggttcacgttag
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