Calonectris borealis (Cory's shearwater): 142088252
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Entry
142088252 CDS
T11211
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
142088252 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142088252 (KDM2A)
04121 Ubiquitin system [BR:
cbor04121
]
142088252 (KDM2A)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142088252 (KDM2A)
Enzymes [BR:
cbor01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
142088252 (KDM2A)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
142088252 (KDM2A)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142088252 (KDM2A)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
142088252 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
142088252 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
142088252
NCBI-ProteinID:
XP_075019507
LinkDB
All DBs
Position
14:19597657..19649194
Genome browser
AA seq
1207 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEEEDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEAEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEEEE
DAAGKEPRRPVTRRSILTSPIANGASVDYDELGRSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPNSGSPRKNRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGIPIVQWPKRDKLKLQARLRVRLPAIPITKPHTMKPTPRPTPVRP
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSTNLQHSPRVVMRHAPARMPLRGGGEEEAA
AEEDEEEEEEEDENTEEGGAARLNGRGGRAQEGEESWMQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggag
gaagacagcagtcctggagtgtccttctcactctcttcagaagagtcggagatggagcct
gaggaagaaaggatccgttacagccaaagactgcgtggcacgatgaggcggcgttatgag
gatgatggcatctccgatgatgaaattgaagggaagaggacatttgacctcgaggaaaag
ctgtccaccaacaagtttaactccaccttcgtggtcttcatggaaggcaaagacttcaca
gttgaatacatccagcggggcggcctgagagaccctctcatcttcaggagctctgacggc
ctgggaataaagatgccagatccggacttcagtgtgaatgatgtgcggctgtgtgtcggg
agccgacggatggtggatgtcatggatgtgaacacgcagagggatattgagatgtccatg
gcacagtgggcacgctactacgaaacgccggaggctgagcgggagaaactttacaatgtc
atcagcctggagttcagccacaccaaactggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccagacacctgaaggagagtcagacagag
tctacgaacgctatcctggagatgcagtatccaaaggtgcagaaatactgtctgatgagt
gtcaagggctgctacacagatttccacgtggacttcggtggtacttctgtgtggtaccac
atccaccgagggggaaagatcttctggctgatccctcctacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatttttcttggggacagagtgtca
gagtgccagcgcatcgagctcaagcagggctacacgtttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacactggtcttcggaggcaacttcttacacagcttc
aacatccctatgcagctccggatctacagcatcgaagaccgcacgcgagtcccaaataag
tttcgttatcccttctattatgagatgtgttggtatgtgctggagcgctacgtctactgc
atcaccagccgctcacatctgaccaaggacttccagaaggaatcactcagtatggatatg
gagctgagctcctcggactcagttaacatggaagaggaggaggaggaagaagaagaggag
gatgcagcagggaaggaacccaggcgaccggtcacaaggcggtccattctcaccagcccc
atagccaacggtgccagtgtggactatgatgaactgggcaggagctgccggagcagcctg
ccgggtctgaagaagaccccgtctatagactcttccgactccagccggggttcccaaaac
ggccaggcctgggacccgaacagtggcagcccgcgcaagaacaggaaggtgcacctgacg
cagtttgagctggaggggctgcgctgcctcgtggacaaactggagtcgctccctctgcac
aagaagtgcgttcccaccggcattgaggatgaggacgcgctcatcgctgatgtcaagctg
ctgctagaagaatacgcgaacagtgaccccaaactggcacttacaggcatccccatcgtc
cagtggcccaagagagataagctaaagctccaggcccggctgagggtgcgcctgcccgcc
atccccatcaccaagccacacaccatgaagccaaccccccgcccgacacccgtcaggcct
acggtctctcccatcgtgtcaggcgccaggcggaggcgggtgcggtgccgaaaatgcaag
gcttgcatgcagggcgagtgtggcatgtgccactattgcagggatatgaagaagtttggt
gggcctggccgcatgaagcagtcctgcgtccttcggcaatgcttagcgcccaggctgcct
cactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcgcaggacttt
gaaaagaagctcatggagtgttgcatctgcaacgagattgttcaccctggctgcctgcag
atggatggggaagggctgctcaacgatgagctccctaactgctgggagtgccccaaatgc
taccagggtgacgacgcagagaagggccagaagcggaaggtggaggagagcgacgacgac
acggcgcaagccaaggtgctgcggcccctgcggagttgtgaggagcccctgacccccccg
cccaactcgcccacgcccatgctgcagctgatccacgacccagcgtcgccgcgaggcgtg
gtgacgcgctcatccccgggagccggccccagcgaccaccacagcgccagcagagacgag
cgcttcaaacgacggcagctgctgcggctccaggccaccgagcgaaccatggtgcgggag
aaggagaacaaccccagcggcaagaaggagctgtcggaggtggagaaggccaagctgcac
ggctcctacctcaccgtgacgctccagcgccccaccaaagacgtccatggcacttctatc
gtccccaagctgcaagccatcacggcctcctccaccaacctgcagcactctccccgcgtg
gtcatgcgccacgcgcccgccaggatgcccctgcggggcgggggggaggaggaggcagct
gccgaggaggatgaggaggaagaggaggaggaggacgagaacacggaggaggggggggcg
gctcggctcaacggccgagggggccgggcgcaggagggcgaggagagctggatgcagcgc
gaggtgtggatgtccgtcttccgctacctcactcgcagggagctctgcgagtgcatgcgg
gtgtgcaagacctggtataagtggtgctgcgacaagagattgtggacaaagatagatttg
agcaggtgcaagtccatcaccccccaggcgctgagcggcatcatcaaaagacagccggtc
agcctcgacctcagctggaccaatatctccaaaaaacagcttacgtggctcgtcaacagg
ctgccaggcctgaaagacctcatcttagcgggctgttcctggtctgcggtctgtgctctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacgcctccgacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgatttccggctcgccggcctggacatcaccgacgccacg
ctgcggctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
caccttacggaccagtcagccaacctcctcacggccgtgggctcctccacacgcaattcc
ctcaccgagctcaacatggcaggctgcaataagctgacagaccaggccttgctgtacctg
cgccgcatctccaacgtcactctaatcgacctgcgaggttgcaaacagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgatgag
aagctgatccaaaaaatcagctag
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integrated database retrieval system
