Calonectris borealis (Cory's shearwater): 142089280
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Entry
142089280 CDS
T11211
Symbol
NTHL1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
142089280 (NTHL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbor03400
]
142089280 (NTHL1)
Enzymes [BR:
cbor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
142089280 (NTHL1)
DNA repair and recombination proteins [BR:
cbor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
142089280 (NTHL1)
Prokaryotic type
142089280 (NTHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-GeneID:
142089280
NCBI-ProteinID:
XP_075021636
LinkDB
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Position
16:complement(16547684..16554614)
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AA seq
291 aa
AA seq
DB search
MCAAGAAGGGRAAARRLGGAAGVSQVHSTAGIPRRSRRRKSVAIAYESGQGDGAEQGTSE
PQRPRWEPRDWRQQLERIREMRRSRDAPVDEMGVEKCYDSSAPPQVMRYQVLLSLMLSSQ
TKDQVTSAAMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYIKQTTAILKQKYG
GDIPRTVEELVQLPGVGPKMAHLAMNIAWDSVSGIAVDTHVHRITNRLKWVKKETRNPEE
TRVALEDWLPRDLWRELNWLLVGFGQQTCLPVNPRCNECLNQDICPAAKRR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcggccggggccgccggaggtgggcgggcggcggcccggcggctcggcggggcg
gccggagtgagccaggtccacagcacagccggcatcccgaggcgcagcaggaggaggaag
agcgtcgccattgcctacgaatctgggcagggggatggtgccgagcaggggacgtctgag
ccccagagaccacgctgggagccaagggactggcggcagcaactggagcgcatccgggaa
atgaggaggagcagagatgctcccgtcgatgagatgggagtagagaagtgttatgacagc
agcgcacctccacaggttatgcgctaccaagttctgctgtcgctgatgctctccagccag
accaaggaccaggtgacatcagctgccatgctgcgcctgaggcagcgtggcctcacagtc
gacagtattttgcagatggatgatgcgacgcttgggcagatcatttaccctgtaggattc
tggaggaacaaggtgaagtacataaagcagacgacagccatcctgaagcagaagtacggg
ggcgacataccgagaactgtggaggagctggtgcagctgccaggcgtggggcccaaaatg
gcccacttggccatgaacattgcctgggacagtgtgtccgggatagctgtggacacccac
gtgcacaggatcacaaacaggctgaagtgggtgaagaaggagaccagaaaccccgaggaa
actcgggtagcgctggaggactggctgcccagagatctctggagggagttaaactggctc
ttggtgggctttggccagcagacctgcctgcctgtgaatccccgctgcaacgagtgcctc
aatcaagacatttgcccagctgctaagagacgctga
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