Calonectris borealis (Cory's shearwater): 142089601
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Entry
142089601 CDS
T11211
Symbol
ITCH
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy homolog isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04120
Ubiquitin mediated proteolysis
cbor04144
Endocytosis
cbor04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142089601 (ITCH)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
142089601 (ITCH)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142089601 (ITCH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142089601 (ITCH)
04121 Ubiquitin system [BR:
cbor04121
]
142089601 (ITCH)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
142089601 (ITCH)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
142089601 (ITCH)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
HECT type E3
142089601 (ITCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
142089601
NCBI-ProteinID:
XP_075022363
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All DBs
Position
17:complement(2273500..2344579)
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AA seq
913 aa
AA seq
DB search
MRSVRSTPGLVVTARPWPLSDSAHAHIPPDFVKSLPQVVLGTAAILAEGRRSCYAAVPVI
SAKLKEKNKWFGPSPYVEVSVDGQSKKTEKCNNTNSPKWKQHLTVIVTPASKLNFRVWSH
QTLKSDVLLGSAALDIHETLKSNSMKLEQVVVTLHLVGDREPAEVVGDLSVCLDGMQVDP
ELLTNGDASSTRSPTQNDSSKVRNDTRTHSNGLESCEDAAPNENKTVNGSDSPLLTNGNC
KPSRPPRPSRPPPPTPRRPTSVAASVNGPSSTSTENDGASAGSLAGTTANTSSEQSPEGA
TAATTAPATAALTTPPVSRQVQPVNPPPQALTTVSQGPLPPGWEQRVDQHGRVYYVDHVE
KRTTWDRPEPLPPSWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQG
AMQQFNQRFIYGNQDFSSTQNKEFDPLGPLPHGWEKRTDSNGRVYFVNHNTRITQWEDPR
SQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKA
KVHYFRFWCQQLAMPQHIKITASRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYG
GVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALF
HGKFIDTGFSLPFYKRILNKPVGLKDLESVDPEFYNSLIWVKENDIEECGLEMFFSVDKE
ILGEIKSHDLKPNGSNILVTEENKEEYIRLVAEWRLSRGVEEQTQAFFEGFNEILPQQYL
QYFDAKELEVLLCGMQEIDLNDWQRHTIYRHYTRTSRQIVWFWQFVKEIDNEKRMRLLQF
VTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKNYEQLKEKL
LFAIEETEGFGQE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgtccggagcacgccggggcttgtagtcactgcgcgcccatggccgctgagc
gactcggcgcatgcgcacatcccgcccgactttgtaaagtcgctgcctcaggttgtgctc
ggaacggctgccatcttggccgagggacggaggagctgctacgccgccgtgcccgtgatt
tcagcaaaactaaaagaaaaaaataaatggtttggacctagcccttatgtggaagtctca
gtagatggacagtcaaagaagacagaaaaatgcaacaatacaaatagtccgaagtggaaa
cagcatcttacagtaattgtcactcctgcaagtaaattaaactttcgagtctggagccat
caaactttaaaatctgatgtccttctgggaagtgctgctctggatattcatgagactttg
aaatcaaatagtatgaaacttgagcaggtagtggtgacattgcatcttgttggtgacaga
gaaccagcagaagtggtaggagatttgtctgtctgtctagatgggatgcaggtagatcct
gagctcctaaccaatggtgatgcctcaagtacaagaagtcctacacagaacgatagctcc
aaagtaaggaatgatacacgaactcactcaaatggccttgaaagctgtgaagatgctgct
cccaatgaaaacaagactgttaatggcagtgattctccattactcacaaatggaaactgc
aaaccttctagacctcccaggccttctagaccacctccacccactccccgcagacccact
tcagtagctgcaagtgtaaatggtccgtcatccacatccacagaaaatgatggggccagt
gcaggatcactggcaggtacaactgcaaatacatcttcagaacagagccctgagggggca
acagctgcaacaacagctcctgcaactgctgcactcaccacacctccagtatcaagacaa
gtccagccagtaaatcctccacctcaggcacttactacagtcagtcaaggtcctcttcca
cctggttgggagcaaagagtagaccaacacggtcgagtatactatgtagatcatgttgaa
aaaagaacaacgtgggatcgaccagagcctcttcctccaagctgggagcgacgagttgac
aacatggggagaatttattatgttgaccacttcactagaacaacaacgtggcagagacca
acgttagagtctgtccgaaattatgagcagtggcagcttcagcgcagtcagcttcaagga
gctatgcagcaatttaatcagagatttatctatgggaaccaggacttttcatccacacag
aacaaagagtttgatcctcttggccctctgccacatggatgggaaaagagaactgacagc
aatggcagagtgtattttgtcaatcacaacacacgaatcactcagtgggaagatcccagg
agtcagggtcaattaaatgagaaacccttaccagagggctgggaaatgcgatttactgtg
gatggtattccatattttgtggatcacaatagaagaaccactacatatatagatccccgc
acgggcaagtctgctctagacaatggaccccagatagcttatgtgcgtgatttcaaggca
aaggtccattatttcagattctggtgtcagcaactggcaatgccacaacacataaagatt
acagcgagcagaaaaacattattcgaggactcatttcaacagataatgagcttcagccct
caggatctacggagacgtttatgggttattttccctggtgaagaaggcttagattatgga
ggtgttgcaagggaatggttctttctattgtcacatgaagttttgaacccaatgtattgc
ctgtttgaatatgcagggaaagataactactgcttacagataaacccagcctcttatatt
aatccagaccatctgaaatacttccgatttattggaagattcattgctatggctttgttc
catgggaaattcattgacactgggttctctctgccgttctataaacgtatcctaaacaag
ccagtaggactcaaggatttagaatctgttgacccagagttttacaactctctcatctgg
gtaaaagagaatgatattgaagaatgtggcttggaaatgtttttctcagttgataaagaa
attctaggggaaatcaaaagccatgatttgaagccaaatggtagcaacattctggtcaca
gaagaaaacaaagaagaatacattaggctagtagcagaatggagactttcccgaggtgtt
gaggagcagacacaggctttctttgaaggcttcaatgaaattctgccacaacagtatttg
cagtactttgatgctaaggaactggaggtgcttctgtgtggaatgcaagaaattgatttg
aatgactggcagaggcataccatctaccggcactatacgcggaccagcagacagatagta
tggttctggcagtttgtgaaagaaatagataatgagaagagaatgagactcttgcagttt
gttactggaacatgcagattaccagtgggaggatttgctgacctcatggggagcaacggc
ccccaaaaattttgtattgaaaaagttggaaaggaaaactggttacctagaagtcatacc
tgtttcaaccgcttagaccttccaccctataagaattatgagcagctgaaggaaaagctg
ttgttcgcaattgaagaaacagaagggtttgggcaagaatag
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