Calonectris borealis (Cory's shearwater): 142090585
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Entry
142090585 CDS
T11211
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142090585 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142090585 (SMG6)
03032 DNA replication proteins [BR:
cbor03032
]
142090585 (SMG6)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
142090585 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
142090585 (SMG6)
DNA replication proteins [BR:
cbor03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
142090585 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
142090585
NCBI-ProteinID:
XP_075024812
LinkDB
All DBs
Position
19:6200716..6319389
Genome browser
AA seq
1454 aa
AA seq
DB search
MAEGLERVRVSAAELRDMVAAQARAAAGGGRENMKEVKEPRHRKDNRRPDLEIYKPGLSR
LRSKLVPPKHEASEKERSRAEEESASDKGPSGGEAPVMEDLSKDDGPKQNGPSQENEQTE
TKGGLQSQENLSKQPAPDEWCPKTTRRTKKPDQQIYQPGKRLHTAAKEPALRSATKEVTS
KMEQLKVEGDEEAEKGTGKDNNRKTKSGKEDRYGSQAGEGVKASRGEKGRRIERSDRMRR
TSDEVMQGKLGSTKRYSCSDKRRSRYRTCSTSSAGSNNSVDGAPLVDGVERRQERARERI
RPRKQLSASSTDSLDDDRIDEAEAYVFSRNSDKKKRSEQSRASRSESEWSSNGREVKGPF
RVTFDSKTMNRDISLADTDKKKPLKAFVSCNDSEASEARSQSREPQGRGRGILFLPANTD
LSASTAGSPEPSHPGPRLLLGGAGSKGLRSRGRGGTARRLWDPNNPDQKPALKSQTAQLH
FLDTDDEVSPTSWGEARQAQTSYYKFQNSDNPYYYPRAAGQGPQYPYGGYSLQYPMGPSN
GVYPGAYYPGYPGQAGQYMCGPLPPTPLSPEMEQQMRNMQQQELSKLLREAGNQEQQLSN
LLSRDRISPEGLEKMAQLRVEMLQLYERCILMDIEFSDTQNVDQLLWKNAFYQVIEKFRQ
LLKDPQGENAQEIRNKLLQLLDEGTSFFDGLLQKLQVSYQFKLEDYMDGMAIRSKPLRKM
VKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAI
YTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEQRKHQVLDLSPSRRGK
GKKSTLRQVGDDATRLEIWIHPSHPRSSQGHESGRDSEQDNGLGNLSPSDLNKRFILSFL
HAHGKLFTRIGMETFPAVAEEVLREFQVLLQHSPPPIGTTRMLQLVAINMFAVYNSQPKE
CVSEDCRSVIQEQATALGLSMFALLVRRCTSLLRECVQVQPREVEQEDDEDDIKVSALPQ
DLKELLPSVKVWSDWMLGHPDTWNPPPTSLELPKQVSVDVWATLADFCNILTTVNQSEVP
LYKDPDDDLALLSLEEDRLLSGFVPLLVAPQEPCYVERTSDKLQETLVWEGACRVALWRP
AGGDGGLPAVVTQVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKE
MGSQEGKQLEDQKEDDVRIEAFEDDSEAEGSGGEMDIKELRAKKQALARKVAEQQRRQDK
IQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLSSLITLLDCRKFILVVPLIVINELDG
LAKGPEMEHRAAGYARQVQERARKSIEFLEERFESRDNCLRALTSRGNELESISFRSEDT
TGQQGNNDDLILSCCLHYCNDKAKDFMPSNKDDPIHLLREVVLLTDDRNLRVKALTRNVP
VRDIPTFLKWAQEG
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggctggagcgcgtccgcgtctcggccgccgagctgcgggacatggtggcg
gcgcaggcccgcgccgcggccggcggcggacgagaaaacatgaaggaagtgaaggagccg
agacatcgcaaagacaacaggcgcccagacctggagatttacaagcctggcctctcccga
ctgaggagcaaactcgtgccaccaaagcatgaggcctcagagaaggagaggagcagagct
gaggaggagagtgccagcgacaagggcccttcaggaggagaggctccagtcatggaggat
ctcagcaaagatgatggccccaagcagaatggtccttcacaggaaaatgaacagacagag
actaaaggtggtcttcagagccaggagaacttgtccaagcagcccgctccggatgagtgg
tgtcccaagaccacgaggagaaccaagaagccggaccagcagatctaccagcctgggaaa
cgcctgcatacagctgctaaagaaccggccctgcggtcagctaccaaggaagtcaccagt
aagatggagcagctgaaagtcgagggagatgaagaagctgagaaaggtactggaaaagac
aacaacaggaaaaccaaatcaggcaaggaggatagatatgggagccaggcaggggaagga
gtgaaagcctcaaggggagaaaaaggaagacgaatagaacgaagtgacagaatgaggaga
acaagcgacgaggtgatgcaggggaagctgggctctaccaaacggtactcctgctctgac
aagcggcggagccgataccgcacctgcagtacaagctcagccggaagcaacaacagcgta
gatggagccccgcttgtggacggggtggagaggcggcaggagcgtgccagagaaagaata
cgtcctaggaagcagctctctgcatcctccacggactccttggacgatgacagaatcgat
gaggcagaagcatatgtcttcagcaggaattcagacaagaaaaagcgttcagagcagagt
cgagcttctaggagtgagagcgagtggagcagcaatggcagggaagtcaagggacccttt
cgagtcacatttgacagcaagactatgaacagggatatcagtctggcagatacagataaa
aaaaagcccctgaaggcgtttgttagttgtaatgactcagaggcttcggaggcaaggagc
cagagcagagagccccaagggaggggccgtgggattctgttcctgcctgccaacacggac
ctctctgccagcaccgcgggctcccccgaacccagtcaccctgggcccaggctcctgctc
ggcggtgctgggagtaaaggcctccgaagcaggggccgaggcggcactgctcgcaggctg
tgggacccaaacaacccagaccaaaaacccgccctgaagagccagactgctcagcttcac
ttcctagacacggatgatgaagtgagccccacctcctggggggaagcccgccaggcccag
acatcctactataagttccaaaactctgacaacccttactattaccctcgggccgccggt
caaggcccccagtatccttacggcgggtactccctgcagtatcctatgggtccaagcaat
ggtgtgtacccaggagcctattaccctgggtaccccggccaggcggggcagtacatgtgc
ggcccactccccccgactccgctgagtcccgaaatggagcagcagatgcggaacatgcag
cagcaggagctcagcaaactcctccgcgaggctgggaaccaggagcagcagctcagcaat
ctgctttccagagaccgcatcagcccggaggggctggagaagatggcccagctgagggtg
gagatgctgcagctgtatgaacggtgcatcctgatggatatagagttctccgatacccag
aatgtggaccagctactgtggaagaacgccttttaccaggtgattgagaaattccggcag
cttctcaaggaccctcagggggaaaatgcccaagaaattcggaacaaactgctccagctt
ctagacgagggcacttctttttttgatggcctactccagaagctgcaggtgtcataccag
ttcaagctggaggattacatggacgggatggccatccgcagtaagcctctgcgaaaaatg
gtgaagtacgcgctgatcagtgctcagaggtgtatgatttgtcaaggggacatttgccga
tacagagaacaagcaaatgacaccgcaaactacggaaaggcacgcagctggtacctgaag
gctcagcaaattgctcccaaaaacggccgcccgtacaaccagctggcgctcctggccatc
tacacgaggagaaagctggatgctgtctactattacatgcgcagcctggctgctagcaac
cccatcctcacagccaaggagagcctcatgagtctgtttgaagagacaaaacgcaaggct
gagcagatggagcagaggaaacatcaggtgctggatctgagccccagccgccggggaaag
ggcaagaagtccacattgcgacaagttggagatgatgccacgcggctggagatctggatc
catccttcccacccccgctcctcccagggacatgagtccggcagggattctgagcaggac
aacggtcttgggaatctcagccccagcgacctgaacaaaaggttcatcctcagttttctc
catgcccatgggaagctgtttaccaggattgggatggagactttccctgcggtggccgag
gaggtcctgagggagttccaggtcctgctgcagcacagcccccctcccatcggaaccacc
cgcatgctccagcttgtggcaatcaacatgtttgcagtgtacaactcccagcccaaagag
tgcgtctctgaagactgccgctccgtcatccaggaacaggccacagccctggggctctcc
atgtttgcactcttggtgaggaggtgcaccagcctgctgagggaatgtgtgcaagttcag
ccacgagaggtggagcaggaggatgacgaggatgacatcaaggtctctgccttgccccag
gacctgaaggagctgctccccagtgtgaaggtctggtcggactggatgcttggccacccg
gacacctggaatcctcctccgacctctcttgagctccccaaacaggtctcagtagatgtg
tgggcgacgctggctgacttctgtaacatactgaccacagtgaatcagtcggaggtgccc
ttgtacaaggacccagatgacgaccttgccctgcttagcctggaagaggatcggctgctc
tcgggcttcgttcccctgctggtcgccccccaggagccctgctacgtggagaggacctcg
gacaagctccaggaaacacttgtctgggaaggagcttgccgagtggcactctggagacct
gcaggaggtgacggtggcctgccagccgtagtgacccaggttattgcagccgactgcaag
agggtcacagttctgaagtatttcctggaagccctttgtggacaagaagagcctttgctg
gcattcaagggtggaaaatatgtgtcagtggcacccgtcccagacgccatgggaaaggaa
atgggaagccaagagggaaaacaactggaagatcagaaggaagatgatgtgaggattgag
gcatttgaagatgattctgaggctgaaggcagcggaggagagatggacatcaaggagctc
agagccaagaaacaagccctggccaggaaagtagctgagcaacagcgtcgtcaagacaag
attcaggccgtgctgaaagaccagagtcaaatgaggcagatggagctggagatcagacct
gtcttcctggtcccagacaccaatggcttcatcgaccacctcagcagcttgataacgctg
ctggactgcaggaaattcatcctggtggtgcccctgatcgtgataaacgagctggatggc
ctggccaagggcccggagatggagcaccgggctgcaggctatgcccgccaagtgcaggag
agagccaggaagtccatcgagttcctggaggagcgattcgagagccgggacaattgcttg
agggctctgaccagccgaggcaacgagctggagtccatctccttccgcagcgaagacacc
actggccagcagggaaacaacgatgacctgattctgtcctgctgcctccactattgcaat
gacaaggccaaggatttcatgccctccaacaaagacgatcccatccatttgctcagggaa
gtggttttgctgacggacgaccggaacctgcgagtcaaagcgttgacccgcaacgtgccg
gtgcgggacatccccaccttcctcaagtgggcccaggagggctga
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integrated database retrieval system
