Calonectris borealis (Cory's shearwater): 142093258
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Entry
142093258 CDS
T11211
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
142093258 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142093258 (AP4B1)
Membrane trafficking [BR:
cbor04131
]
Endosome - Golgi transport
Others
AP-4 complex
142093258 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
HEAT_MROH2B_C
PDS5
HEAT_GCN1
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
142093258
NCBI-ProteinID:
XP_075030354
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Position
26:complement(8178386..8186537)
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AA seq
740 aa
AA seq
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MPYLGGEEALRELRRALSNPHVQADRLRYRAAVLRVIRHMAQGADVSGLFPEMVKASAAA
DVVQKKLVSLFVRAQAPRQPQLALLAVNTLRKDCAHPSPAVRGLALRSMCGLRMPGIQEY
LQQPLLSGLRDKASYVRRAAVLGCAKMLKLQGDSEVDGALVNELYSLLRDQDPIVVVNCL
RALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLTFLLRYRPRSEEELFDILNLL
DSYLKSSSPSVVMAATKLFLVLAREYPHVQADVLVRVKGPLLSACTSESRELCFTALCHV
RQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKGYCTDVS
VELAQGAIFAIGNIARTYTEQCVWILTELLGLQQEHITSAVVQAFRDLVWLCPQCTDAVC
RALPTCEDAIQDSEGKQALIWLLGAHGEKVPNAPYVLEDFVENMKSEMFPAVKMELLTAL
VRLFLSRPAECQDMLGRLLYYCIEEEMDMAVRDRGLFYYRLLQSGVEEVKRVLCSPKSDP
SLGLLEDQTERPVNTWALEFNTLAPVYGREHWALVTAHQPAEPSYACSPCTDSRNRGTES
LISEGNKEVLKVHPDTGSLTLIPDVYLTAEQFEKTWLSLDMSCHLSLPWCGTVHPDTMQT
ALHVVHIQTIAMSKAGLQPWKAYLSAQDDTGCLFLTELLLEAADSEMQVSVKQSEAKPEA
LQTFISVLRMVMGTVAGLGS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacctgggcggcgaggaggcgctgcgggagctccgccgggctctgtccaacccg
cacgtgcaggcggaccggctgcggtaccgcgccgccgtcctgcgcgtcatccggcacatg
gcgcagggcgcggacgtgtcggggctgttcccggagatggtgaaggccagcgcggcggcc
gacgtggtgcagaagaagctggtgtcgctgttcgtgcgggcgcaggccccgcggcagccg
cagctggcgctgctggccgttaacacgctgcgcaaggactgcgcccaccccagccccgcc
gtgcgggggctcgctcttcgcagcatgtgcggcctcaggatgcccggcattcaggagtac
ctgcagcagcccctcctcagcggcctgcgggacaaggcctcctacgtgcgcagagcggct
gtgctcggctgcgccaagatgctgaagctgcagggggactccgaagtggatggtgcattg
gtgaatgagctatacagtttgcttcgtgatcaggatcctattgtagtcgtgaattgtctg
agggccttagaagagatcttgaagaaggagggaggagttgtcatcaacaaacccattgcc
catcatctcctcaacaggatggctgatctggatcagtgggggcaaagtgaggtgcttacc
ttccttctgcgttacagaccccgcagtgaggaggaactctttgacatactcaacctactg
gacagctatctcaaaagcagcagccccagcgttgtgatggcagccaccaaacttttccta
gtgctggccagggagtacccacatgtgcaggcagatgttttggtgagagtgaagggacca
ctgctgtctgcctgcacttctgagagcagggagctctgcttcactgcactgtgccatgtg
cgtcagatccttggtagccttcctggccattttagcagccactacaaaaagttcttctgt
tcgtattcagagccccactacatcaaatgccagaaaatggaggtgttgtgtgagctggtg
aatgatgaaaacgtacagcaagtgctggaggagctgaagggctattgcactgatgtatca
gtagagcttgcccaaggggcgatcttcgccataggcaatattgctaggacatacacagaa
cagtgtgtgtggattctgacagagctcctggggcttcagcaggaacatatcacttcagcg
gtagtacaggcttttcgggacctggtttggctgtgtccccagtgcacagatgccgtgtgt
cgggcactgcctacctgtgaggatgccatccaggacagtgagggcaagcaagcactgatc
tggctcctgggtgcacatggtgagaaagtaccgaatgccccctatgttttagaggatttt
gtggagaacatgaaatcagagatgttcccagcagtgaagatggagcttctgacagcattg
gtgcgacttttcctgtctcgtcctgctgagtgtcaggacatgctagggagactgctctat
tactgcatagaggaggagatggatatggcagtacgagaccgtggattgttctactatcgc
cttttgcagtccggtgtggaagaagtgaaacgggtcctgtgtagccccaagtctgacccc
tctctggggctcctggaagaccaaactgagcgacccgtgaatacatgggctttggagttt
aatactcttgcaccagtttatggcagagaacactgggcactcgtcactgctcaccagcca
gcagaaccctcttacgcttgttctccttgtactgactccaggaacagaggcacagagtca
ctgatttctgaagggaataaagaagtcctcaaggttcatcccgatacaggcagcctgacc
ttaattcctgatgtttacctgactgcagaacagtttgagaagacctggctgagcttggac
atgagctgccacctctctctgccctggtgtgggactgttcatccagataccatgcagacg
gctcttcacgttgtccacatccagactattgctatgagcaaagctggcctccagccgtgg
aaagcttatctcagtgctcaggatgacacaggttgcctcttcctaacagagctcttgctt
gaggcggcagattcggagatgcaggtttcagtgaagcagagtgaggcaaagccggaggca
ctgcaaacctttatttcggtgttaaggatggtcatggggacggttgctggactggggtcc
tga
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