Calonectris borealis (Cory's shearwater): 142093691
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Entry
142093691 CDS
T11211
Symbol
MADCAM1
Name
(RefSeq) mucosal addressin cell adhesion molecule 1
KO
K06779
mucosal vascular addressin cell adhesion molecule 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04514
Cell adhesion molecules
cbor04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
142093691 (MADCAM1)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
142093691 (MADCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142093691 (MADCAM1)
Cell adhesion molecules [BR:
cbor04515
]
Immunoglobulin superfamily
Other
142093691 (MADCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
Adhes-Ig_like
ICAM_N
C1-set
C2-set_2
ICAM1_3_5_D2
Motif
Other DBs
NCBI-GeneID:
142093691
NCBI-ProteinID:
XP_075031186
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All DBs
Position
28:3550477..3553219
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AA seq
476 aa
AA seq
DB search
LSPSLNPAVSSFLHPGRSADKLAVVPREPVVQYGGSAQLNCSLACAGGTVQWKGLDTNLG
SITSFPTHSILHINSAVVAMGGTKICQGTCHGQRYQHAVTLKVYALPDTLQLEVGPRALQ
PGQPANLRCSARRVYPLTGLVLTWHRGDQALEEADFDVTETDEELFDIVATLPVAGKEVG
EGVEFRCKVTLSIGQETFTRVASVTVSAGAVTEQPVAMATSTGRPRTTAATTGSPSTAEP
MTTTVLPPEPSVPTHDPTTALTTTPREPDAETILEPAASSKPPSTERPAPHDLVAGSPTA
RLATTTLPGSGTASPPAEAQGTAAGTINWGSPLAKNGTGPSVGTVPACSLRIWSLPPNGT
RGRALRIECRARCAGNATVRWLRTPVALSQYREEAVGSSSTLRLDHAEPRHQGHYQCVLL
GHRSQVVSLQLMVLDDSFSTGPAIAMGTTVSLLGLIVTGIMSRRLWKRFRSQYELP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccttccctaaaccccgcggtttcctccttcctccacccagggcgatccgctgac
aagctggcggtggtgccgcgggagccggtggtgcagtacgggggctcggcgcagctgaac
tgctccctggcctgcgcggggggcacggtgcagtggaaggggctggacaccaacctgggg
agcatcacctccttccccacgcacagcatcctgcacatcaacagcgccgtggtcgccatg
gggggcaccaagatctgccaggggacctgccacgggcagcgctaccagcacgccgtcacc
ctgaaagtctacgccctcccggacacgctgcagctggaggtaggcccccgcgccctgcag
ccggggcagcccgccaacctgcgctgctcggcccggcgggtgtacccgctcacggggctg
gtgctcacctggcatcggggggaccaagcgctggaggaggcagacttcgatgtcacagag
accgacgaggagctgtttgacatcgtggccacgctgccagtggctgggaaggaggtggga
gaaggagtggagttcaggtgcaaagtgacgctgagcatcgggcaggagaccttcacccgg
gtggcatctgtgaccgtgagcgctggggctgtaacagagcagccggtggccatggccacc
tccacagggagacccaggacaacggcggctacgacggggagtcccagcacagccgagccc
atgaccaccacagtgctgcccccagagccgagtgtccccacacatgatcccaccacagcc
ctgaccaccacaccgcgggagccagatgctgagaccatcctggagccagctgcctcctcc
aaacccccctccacagagcgccctgctccccacgacctcgtcgcaggcagtcccacggca
cgtctggccaccaccacgctccctggctccggcacggcgagccccccagctgaggcgcaa
gggacagctgcaggcaccatcaactggggctctccgctggcaaagaacgggacagggcca
tccgtggggacagtgcccgcctgcagcctgcggatctggtcgctgcctcccaacggcacg
cggggcagggccctgcgcatcgagtgtcgcgcacggtgtgccgggaacgccaccgtccgc
tggctgcggacccccgtagccctctcgcagtaccgggaggaggcggtgggcagcagctcc
acgctgcgcctggaccacgccgagccccggcaccagggccactaccagtgcgtcctgctc
ggccaccgctcccaggtggtcagtctgcagctgatggtcttggatgattcgttcagcacg
ggccctgccatcgctatggggacaacggtctcgctcttgggactgatcgtgaccggcatc
atgtctcgtcgcctgtggaaacgattcagatctcagtacgagctgccctag
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