Candidatus Viadribacter manganicus: ATE48_15370
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Entry
ATE48_15370 CDS
T04422
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cbot
Candidatus Viadribacter manganicus
Pathway
cbot00300
Lysine biosynthesis
cbot00550
Peptidoglycan biosynthesis
cbot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ATE48_15370
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ATE48_15370
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbot01011
]
ATE48_15370
Enzymes [BR:
cbot01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ATE48_15370
Peptidoglycan biosynthesis and degradation proteins [BR:
cbot01011
]
Precursor biosynthesis
Amino acid ligase
ATE48_15370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ANP47198
UniProt:
A0A1B1AKU1
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All DBs
Position
3003385..3004827
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AA seq
480 aa
AA seq
DB search
MKLGDLFDYGVPEGAGAIDITGLTADSRKVKPGFLFAALKGVAAHGRDFVEQAKANGAVA
VLSAGDLGFDPGIAEVVTKEPRRDFALAASAFYVRRPRTIVAVTGTNGKSSTVDFLRQIW
THAGKRAASLGTLGAIGPNGVVDLGHTTPDPAAMHESLSTLSDQGVTHVAMEASSHGLEQ
HRVVGVTFAAGAFTNLTQDHLDYHLDMASYRDAKLKLWELVRVGGPAVINADAADADLFE
RAAKQNELDVVLCGWRAPREHALKIVEILPRPNAQTMVLLWDGKEHKVELPLIGEFQALN
AVCAAALALATGEALEAVLAGMAKLKPVKGRMEHIGQSKSGGHVFVDYAHTPDGLDVLLR
AARPHAPGRIIAVFGCGGDRDSDKRPKMGAIAARQADIVIVTDDNPRSEDPAAIRAQILK
AAPNATEIGDRAQAIREAVAMLKAGDALMIAGKGHETGQIIKGVTHPFSDQDIARAALES
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcggcgatctctttgactacggcgtccctgagggcgccggggcgattgatatt
accggtctcaccgcggattcacgcaaagtgaagccgggctttttgttcgcggcgctcaag
ggcgtcgccgcgcacggtcgcgatttcgttgagcaggccaaagccaatggcgccgttgca
gtgctatcggcgggcgacctcggcttcgatcctggtatcgcggaagttgtcacaaaggag
ccgcgccgggattttgcgcttgcggcgtctgctttctatgtgcgcaggccccggacgatt
gtcgccgtcacgggcacgaacggcaaaagctccactgtcgattttctccgtcaaatatgg
acccacgccggtaagcgtgcggcaagtctaggcactcttggggccatcggtccgaacggg
gtggttgatcttggccacaccacgcctgatccggctgccatgcacgagtcgctgtcgacg
ctttcagatcagggcgtcacgcatgttgcgatggaagcgtccagccacgggctggagcag
caccgcgttgttggcgtcaccttcgccgcgggcgctttcaccaacttgacgcaggatcac
cttgattatcacttagatatggccagctatcgcgacgcaaagctcaagctttgggagctc
gtgcgcgttggcggaccagcggtgatcaacgctgacgcggccgacgctgatcttttcgaa
cgagctgccaagcagaacgaattggatgtcgtgctctgcggctggcgtgcgccgcgcgaa
catgcgttgaagatcgtggagatactgccgcgtccgaatgctcagacgatggtgctgttg
tgggatggcaaagagcacaaggttgagttgccgctgatcggtgagttccaggcgctcaac
gctgtttgtgcagcggcgctagccttggctacgggtgaggcgctggaagcggtgcttgct
ggcatggcgaagctcaagccggtgaagggccgcatggagcatatcggtcagagcaagagc
ggcggccacgtatttgtcgattacgcgcacacgccggatggccttgatgtgctgttgcgc
gccgcgcgtccgcacgcgcccggacggatcatcgccgtgtttggatgcggcggtgatcgc
gattccgataaacggccaaagatgggcgcgattgccgcgcgtcaggccgacattgtaatt
gtcactgacgacaatccgcgcagcgaagatcccgctgcgatccgcgcgcagattttgaaa
gccgcgccaaacgcgaccgagattggcgaccgcgcgcaagcgatccgcgaggctgttgcg
atgctgaaagccggcgatgcgctgatgatcgcgggcaagggtcacgagactggacaaatc
atcaagggcgtcacgcatccgttctcggatcaggacatcgcgcgcgctgcgctggagagc
tga
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