Ciconia boyciana (Oriental stork): 140643391
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Entry
140643391 CDS
T10948
Symbol
TIAM1
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04530
Tight junction
cboy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140643391 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
140643391 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cboy04990
]
140643391 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
cboy04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
140643391 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
RNA_pol_Rpc82
PH_11
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
140643391
NCBI-ProteinID:
XP_072701170
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All DBs
Position
1:complement(116395531..116589663)
Genome browser
AA seq
1599 aa
AA seq
DB search
MGNAESQSVEHAFYGDKHAGLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSS
STPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVL
TAASVQSMPDSEESRLYGDEPPFLAEGDGRSQRYAANGTNFMETASFKKKRSKSADIWRE
DSLEFSLSDLSQEHLTSNEEILGLAEEKDAEATRGTEASGSPQPLVTCQRANSMSDLYSP
KTPSATVNGGPRNAFGGYCRNLVSDIPDIGSHKMASVTAEDAPSYSNYNTLPCRKSHCLS
EGATNPQISHSTSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYS
PTASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLS
SPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYE
TDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENW
ITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKK
TILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFS
VSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQVFGE
GVDSVKKSLEGIFDDTVPDGKREKEVALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPAL
TVIRPGDTTRDVLEIICKTHQLDHTAHYLRLKFLIENQIQFYVPKPEEDIYELLYKEIEI
CQKITQHIQIEKSDASSDIYGFSLSSVEEEGIRRLYVNGVKETGLAFKKGLKAGDEIVEI
NQKAAEDLDSALLKDALVQPSLCLTVRTYPEIEEGQKLMQPPPRRLENPSDLSDSTLAFA
GSNQAGHSLCGNPDSSVDTAPEEAEAQDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDS
SAHPQEFTGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLT
PDELDVLFGNLTEMVAFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYAD
RFKLYSAFCASHTKVPKVLVKAKTDTAFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYP
LLLKELFALTDVDSEEHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLIGEQTGEKK
EVADLSMGDLLLHNTVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGS
HRASIYEDWDPFRFRHMIPLEALQVRALASADAETNSVCEIVHVKSESEGRPERTFHLCC
SSPEHRKDFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCALKGARPAMNRAVS
APSKSLGRRRRRLARNRFTIDSDAVYMSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQE
DIKETDILSDDDEYCEAMRGAVADRDLRERLQAASITSSQPCRGDRLRPAMDTHASRMTQ
LKKQAALSGINGDVEGHGEEVIWVRREDFVPSRKLNTEL
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcagagagccagagcgtggagcacgccttctacggagacaagcatgccggc
ctcggccgcaagcacacttcccgctcgcttcgcctttccaataaagcctctcgccggaca
cggcacgcttcttccggaaaaattatccaccgtaactcagaagtgagcacccgctccagc
agcacccccagcatcccccagtccctggcagagaatggcctggagccctttgcccaggag
gccaacctagaggactttggaagccccatctgggtggaccgtgtggacatgggcctgcgg
cccgtttcctatcacaccgactcctccgtcacccccagcgtggacagcagcactgtcctc
accgccgcctccgtccagagcatgcccgactcggaggagagcaggctctacggggacgag
ccgccgttcctggcggagggcgacgggaggtcacagcgatacgcggccaacgggacaaac
ttcatggagacagccagcttcaagaagaagcgctctaaatcggccgacatctggcgtgag
gacagcttggagttttcactttctgacctcagccaggagcatttaacgagcaacgaggaa
atcctgggcttggccgaggagaaggatgccgaggccacccgggggacggaggccagcggc
agcccccagccgctggtcacctgccagcgcgccaactctatgagtgacttgtattccccc
aaaaccccgagcgctaccgtcaatggcggcccacgaaacgcctttggagggtactgccgg
aatttggtgtccgacatcccggatattgggagccataagatggcatcagttactgctgag
gatgcgccttcctacagtaattacaatacgctgccctgtaggaaatcccactgcctttcc
gaaggggccaccaacccacaaattagccatagtaccagcatgcaaggcagaagggcgaaa
actactcaggacgtcaacgcaggcgaggggagcgagttcaccgacagcgggatcgaggga
gcagccaccgacaccgacctcctttctcgacgctccaatgctaccaactcgagttactcc
ccgacggccagtcgggctttcattggcagcgacagcgggagcagctcaacgggcgacggg
cttcgccagggggtgtacgagaacttccgccgggagctggagatgagcaccaccaacagc
gagaacctggaggaggccggctctgccctcagtgatgagcagagcagcggcaccctcagc
tccccggggcagtccgacatcttgctgacggctgcccagggcacggtacggaaagccggt
gctctggcagtgaaaaacttcctggtgcacaaaaagaacaagaaagtggagtcggccacc
cgcaggaaatggaagcactactgggtttccctgaaaggatgcacgttgtttttttatgag
actgatggcagatctggcattgaccacaacagcatcccaaagcacgctgtgtgggtggaa
aacagcatagtgcaagcggtgcctgaacaccccaagaaggactttgtcttctgtctcagc
aactcccttggggacgctttcctctttcagacctctagccagaccgaattggagaactgg
atcactgcaatccattcagcttgtgcaaccgcggtggcaaggcagcatcacaaagaggac
accgtcaagctcctgaaaacagagataaaaaagctggagcagaagattgatatggatgaa
aagatgaagaaaatgggtgaaatgcagctgtcctcagtaacggactccaagaagaagaag
accatactggatcaaatcttcgtttgggaacaaaatcttgaacagttccagatggaccta
tttcggtaccgctgttacttggctagtctccaaggaggggagctcccaaaccctaaaaga
ctgcttgcttttgccagccgtccaacgaaagttgcaatgggccgtcttggaatcttttca
gtctcgtcgtttcatgcactggtggcggctcgcacaggggagtctggagtgaggagaagg
acgcaggccatgtccagatctgctagtaaacggagaagcaggttttcttctctttggggg
ctggatactacctcgaagaaaaagcaagggaggccaagcattaatcaggtgtttggtgaa
ggagttgattcagtaaagaaatctctcgaaggaatctttgacgatacggtcccggatggc
aagagggaaaaagaagtggcactgagcagtgtccatcagcacaatcccgactgtgatatt
tgggttcacgagtattttacgccgtcttggttctgcctgccgaacaaccagcctgctctg
acagtcatccgtcctggggacaccacacgagatgtgctggaaattatttgcaagacacac
cagctggatcacactgctcactacctgcgtcttaaattcctgattgaaaaccagatccaa
ttttatgtaccaaagccagaagaggatatctatgaactgctgtacaaagaaatcgaaatc
tgtcagaaaattacacagcacattcaaatagagaagtctgatgcatcctctgatatttat
ggtttctctctgtcctctgtggaagaagaagggattcgtcggctgtatgtgaacggcgtc
aaagagacaggcctggctttcaagaaaggcctgaaagctggcgatgaaattgtggagatc
aaccagaaagctgctgaggatctggactcagctttgctgaaagatgcccttgttcagcct
tcgctgtgtcttactgtgcgcacctatcctgagatagaggaagggcagaaactaatgcag
ccaccaccacgtcgcttggaaaacccgtctgacttgagtgacagcaccctggcatttgct
gggagcaaccaagcagggcactcgctttgcggcaacccggacagctctgttgacacagct
ccagaggaggcagaagcgcaagacttggagtcatctgatgaggccgataagatgagcaag
agtacagagcaggtcgctgctttctgtcgcagtctgcatgaaatgaacccttctgattca
agtgctcatcctcaggaatttacaggaccccagctggccaccatgcgacaactcacagat
gcagataaactgcgaaaggttatctgtgaacttctcgagacagagcgcacctatgtcaaa
gatttaaattgtctaatggagagatacctgaagcctctacaaaaagaaacgttcctcaca
ccagatgagctggatgttctctttgggaatctgactgaaatggtagcattccaggtagag
ttcttgaaaactcttgaagatggagtaaggctggttccagacctggaaaagcttgaaaag
gttgagcaatttaagaaagtattgttttccttgggtggatcctttctttactatgccgac
cggttcaagctgtacagtgccttctgtgccagccacacaaaagtccccaaagtactggtg
aaagccaagacagacactgctttcaaagcatttctggatgctcagaatccccgacggcag
cactcctccacgctggagtcttacctcatcaaacccatccaacggatactgaaataccct
ctcctgctgaaggagctctttgctctgactgacgtagacagcgaagaacattatcacctt
gatgtggccataaaaacaatgaacaaagttgccagccacatcaatgaaatgcagaaaatc
catgaagaatatggggcagtgtttgaccaactcataggagaacaaacaggggagaaaaaa
gaggttgcagacctttcgatgggggacttgctcttgcataatacagtgatatggctgaat
cctcctgcttcactgggcaaatggaagaaggaacctgagctggcagcatttgtgttcaaa
actgctgtggtccttgtatacaaggatggttccaaacagaagaagaaacttggaggatca
catagagcttcaatttatgaagactgggatccgttccgctttcgccacatgataccttta
gaagcactgcaggttcgagcgttggcaagtgcagatgcagagaccaactctgtatgtgag
attgtccatgttaaatctgagtctgaaggcaggccagaaagaacgtttcacctttgctgt
agttcaccagaacacaggaaggactttctgaaggcagtgcactcaattctgcgcgataaa
cacagaaggcagcttcttaaaaccgaaagtttgccctcatcccagcaatatgttcctttt
ggtggaaaaagattgtgtgctctaaaaggtgcaaggccagccatgaacagggcagtgtca
gccccaagcaagtctcttgggaggaggaggcggcggctggcccgaaacaggtttaccatt
gactcagatgccgtctacatgagcagccctgaaaaagagccccagcagcccacgcacagt
ggggacactgaccgctgggtagaggaacagtttgaccttgctcagtatgaagagcaggag
gacatcaaggaaacggacatcctcagcgatgacgatgagtactgcgaggccatgagaggt
gccgtggcggaccgagaccttcgggagcggctgcaggcagcctccatcacgagtagccag
ccgtgccggggagaccgcctgcgcccagccatggacacacacgcctccaggatgacccag
ctgaagaagcaggcggccttgtccggcatcaacggtgacgtggagggccacggcgaggag
gtcatctgggttaggcgtgaagactttgtccccagcaggaaactgaacacggagctctaa
DBGET
integrated database retrieval system
