Ciconia boyciana (Oriental stork): 140646718
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Entry
140646718 CDS
T10948
Symbol
RRP8
Name
(RefSeq) ribosomal RNA-processing protein 8 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140646718 (RRP8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cboy04131
]
140646718 (RRP8)
04121 Ubiquitin system [BR:
cboy04121
]
140646718 (RRP8)
Membrane trafficking [BR:
cboy04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
140646718 (RRP8)
Ubiquitin system [BR:
cboy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140646718 (RRP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
F-box
Methyltransf_11
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Methyltransf_31
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Methyltransf_25
PQQ_2
WD40_RFWD3
Ge1_WD40
Beta-prop_NWD2_C
KNTC1_N
PALB2_WD40
Anamorsin_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
140646718
NCBI-ProteinID:
XP_072707186
LinkDB
All DBs
Position
1:complement(220241112..220257464)
Genome browser
AA seq
1138 aa
AA seq
DB search
MFAEEAWNDGAEGPARARARPGPRGAPEGPGRPAPAAAAGKRRRRRPGDCAAEPGRDGEP
ARKRPGERRQAARRRAAAEGRPAGSGEPQQSGQRPDGGTAARRSRGAGRACWGGPGREPP
AAAAALTSLPVPPGASAELRGERPRPSAEPGAPGTEAAAGEPARRPSRRQRRSKRRQQSE
RQAGPAGEPGADGLAGAGPGAPALPGPEAAPAGRSAALRARMEERLLAARFRYINQQLYT
STSREAAQLFRSDPEAFEIYHRGFAQQVGRWPENPVHRIVRYLRRRPASLVVADFGCGDC
KIASSVRNKVHSFDLVPLSPLVTVCDMAKVPLAAESVDVAVFCLALMGTNLQEILEEANR
VLKQGGTLMVAEVASRFEDIRAFVNAMAQLGFKSVSKALQLSLGAGKACGNRKDCIGMAV
LGRRCPLPQMGAVARTCSTKELKGFNSLDDLLHVKGITTRILELNSQRMTCRRRPSSEEA
ARVSPGLQGDSKAPVPQVVAEEEDVSGPWEPERSGKGSPGSGPEADDASGQGAQEPVSST
GCGEQEEEEEEEEEEEGSCYSEEGEDGSNVYFYYTIGERWIDYLQRTEDGGLLRHVRPKM
KRKSENGLDGRALSPGKKLCKGSEYSRTLGPCMPSPTTTFGDLRNAKAGQARRRRIPSVA
PPPELQDWLRTFQRWSGPEKLLALDELIDRCEPSQIKYMMQVIEPQFQRDFISLLPKELA
LYVLSFLEPRDLLRAAQTCRYWRVLAEDNLLWREKCREEGIEEPLNLRKRRLLSPGFMYS
PWKFAFMRQHKIDMNWRSGELKAPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAV
TGECVQTLVGHTGGVWSSQMRDSIVISGSTDRTLKVWNADTGECVHTLYGHTSTVRCMHL
HGNRVVSGSRDATLRLWDIETGQCLHVLMGHVAAVRCVQYDGHKVVSGAYDYTVKVWDPE
SESCTHTLQGHTNRVYSLQFDGTHIVSGSLDTSIRVWDVESGNCLHTLMGHQSLTSGMEL
RDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFSSKFVVTSSDDGTVKLW
DLKTGEFVRNLVALESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDLK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcggaggaggcgtggaacgatggggcggagggccccgcccgggcccgggctcgg
ccggggccccgcggcgcccccgagggcccgggccggccggcccccgcggcagcggcgggg
aagcggcgccggcgacggccgggggactgtgcggccgagcccggccgggacggcgagccc
gcgcggaagcggcccggggaacggaggcaggccgccaggcgccgggctgcggcggagggg
cgcccggccggctccggggagccgcagcagagcgggcagcgcccggacggaggtaccgcc
gcccgcaggtcccgaggcgccggccgggcctgctgggggggccctggccgggagccgccc
gccgccgccgccgccctgacttccctcccggtccccccaggcgcgtcggccgagctgcgg
ggggagcggccccggccgagcgcggagcccggggcgccggggacggaggctgcggccggg
gagccggcgcggaggccgagcaggaggcagcggaggagcaagcggcgccagcagagcgag
cgccaggcgggacccgcgggggagccgggcgcggacgggctggcgggcgcgggaccgggc
gccccggcgctgcccggcccggaagcggctccggcggggcggtcggcggccctgcgcgcg
cgcatggaggagcggctcctggccgcccggttccggtacatcaaccagcagctctacacg
tccaccagccgggaggcggcacagctcttccggagcgaccccgaggcgttcgagatctac
caccgcggcttcgcgcagcaagtggggcgctggccggagaaccccgtgcaccgcatcgtc
cgctacctgcgccggcggccagcctcgctggtggtggcggattttgggtgcggtgactgc
aagatcgcgagcagcgtcaggaacaaggttcactccttcgacctggtgcctctcagcccg
ctggtcaccgtctgcgacatggccaaggtgcctttggcggccgagtcagtggacgttgcg
gtgttctgcctggcgctgatgggcaccaacctgcaggagatcttggaagaggccaaccgt
gtgctgaagcaggggggtaccctgatggtggctgaggtggccagccgcttcgaggacatc
cgagccttcgtgaacgccatggctcagctgggcttcaaaagtgtctccaaggcattgcag
ttgtcgctcggggcagggaaagcttgtggaaacaggaaggactgcattggaatggctgtt
ttgggcagaaggtgtcccttgcctcagatgggagcagtagcgaggacttgcagtacaaag
gagctgaagggcttcaactcactcgatgatcttctccatgtcaaaggcatcaccacccgc
atcttggagctgaacagtcagcggatgacttgcaggaggaggccaagcagtgaggaggct
gcgagggtgagccctggtctgcagggggacagtaaagctcctgtgcctcaggtggtggct
gaggaggaggatgtttcaggcccctgggagccagagcgctctgggaaagggagcccaggg
tcaggaccggaggctgacgacgccagtgggcaaggggcgcaggagccagtcagctccaca
ggctgtggggaacaggaggaggaggaggaggaggaagaagaggaagaggggagctgctac
agcgaggaaggggaggatggcagcaacgtctacttctattacaccattggagagcgctgg
atagactatctgcagcggacagaggatggcggcctcctccgtcacgtgcggcccaagatg
aagcggaagtcggagaacggcctggatggcagggccctttcccccggtaaaaagctgtgc
aagggctctgagtacagcaggacactgggtccctgcatgcccagtcccacgactaccttt
ggggacctgcgcaacgccaaagcaggccaggcacggcgccgacgcatcccctcggttgcc
cctcctcccgagctgcaggactggctccgcaccttccagcggtggagtggcccagagaag
ctgcttgctctggatgagctcattgatcgctgcgagccctcccaaatcaagtacatgatg
caggtcattgaaccccagttccagagagacttcatttccctgctgcccaaggagctggca
ctctatgtcctctcattcctggagcctcgcgacctgctgcgtgctgcccagacctgtcgc
tactggagggtcttggctgaagataacctgctttggagagagaaatgccgcgaagaaggc
attgaggagcccttgaacctgcggaagcggcgcctgctgagccctggattcatgtatagc
ccctggaaatttgccttcatgcggcagcacaaaatcgacatgaattggcgcagtggggag
cttaaagcccccaaggtgctgaagggacatgatgaccatgtcattacctgcctgcagttc
tgtggcaaccggatagtcagtggctcagacgacaatacgctcaaagtgtggtcagcggtc
actggggagtgtgtgcagacactggttggccacacagggggtgtgtggtcttcccagatg
agggacagcattgtcatcagcggctccacggaccggacgctcaaagtgtggaatgcagac
acaggcgaatgcgtgcacacactgtacgggcacacgtccacagtgcgctgcatgcacttg
catgggaacagggttgtgagtggctcacgggacgccactctgcgcctctgggacatcgag
actgggcaatgtctgcatgtgctgatggggcacgtggctgccgtgcgctgcgtgcagtat
gacgggcacaaggtggtgagcggtgcatatgactacacagtgaaagtctgggaccccgag
agcgagagctgcactcacacactgcagggacacacgaaccgcgtctactccttgcagttt
gatgggacacacatcgtgagcggctctctagacacgtcgattcgcgtgtgggacgtagag
agtggaaactgcctacacaccctcatggggcaccagtcgctcacaagtggcatggagtta
cgtgacaacatccttgtatctggcaatgctgactccacggtcaagatctgggacatcaag
acgggccagtgtctgcaaacactgcaggggcccagcaagcaccagagcgccgtgacctgc
ctacagttcagctccaagtttgtggtgactagctcagatgatggtaccgtcaagctctgg
gacctcaagacgggcgagtttgtgcgcaacctggttgcactggagagtgggggcagcggg
ggcgtagtgtggcgcatccgcgcctccaacaccaagctcgtgtgtgcggtgggcagccgc
aatggcacagaggagaccaagctgctggtgctggactttgatgtggacctgaaatga
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integrated database retrieval system
