Ciconia boyciana (Oriental stork): 140652849
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Entry
140652849 CDS
T10948
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140652849 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cboy03000
]
140652849 (KDM2A)
04121 Ubiquitin system [BR:
cboy04121
]
140652849 (KDM2A)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140652849 (KDM2A)
Enzymes [BR:
cboy01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
140652849 (KDM2A)
Transcription factors [BR:
cboy03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
140652849 (KDM2A)
Ubiquitin system [BR:
cboy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140652849 (KDM2A)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
140652849 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
140652849 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
140652849
NCBI-ProteinID:
XP_072720252
LinkDB
All DBs
Position
6:complement(2255324..2307308)
Genome browser
AA seq
1207 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEEEDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEAEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSESVNMEEEEEEEEEE
DAAGKEPRRPVTRRSILTSPIANGANVDYDELGRSCRSSLPGLKKTPSIDSSDSSRGSQN
GQAWDPNGGSPRKNRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVKL
LLEEYANSDPKLALTGIPIVQWPQRDKLKLQARLRVRLPTIPITKPHTMKPTPRPTPVRP
TVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLP
HSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPKC
YQGDDAEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRGV
VTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKLH
GSYLTVTLQRPTKDVHGTSIVPKLQAITASSTNLQHSPRVVMRHTPTRMPLRGGGEEEAA
AEEEEEEDEEEDENAEEGGAARLNGRGGRAQEGEESWMQREVWMSVFRYLTRRELCECMR
VCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVNR
LPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSQDNR
SKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCNHLTDQSANLLTAVGSSTRNS
LTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQITRKACEHFISDLSINSLYCLSDE
KLIQKIS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggag
gaagacagcagtcctggagtgtccttctcactctcttcagaagagtcggagatggagccc
gaggaagaaaggatccggtacagccaaagactgcgtggcacgatgaggcggcgttacgag
gacgatggcatctccgatgatgaaattgaagggaagaggacatttgacctcgaggaaaag
ctgtccaccaacaagtttaactccaccttcgtggtcttcatggaaggcaaagacttcaca
gttgaatacatccagcggggtggcctgagagaccctctcatcttcaggagctctgacggc
ctgggaataaagatgccagatccggacttcagcgtgaatgatgtgcggctgtgtgttggg
agccgacggatggtggatgtcatggatgtgaacacgcagagggatattgagatgtccatg
gcacagtgggcacgctactacgaaacaccagaggccgagcgggagaaactttacaatgtc
atcagcctggagttcagccacaccaaactggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccagacacctgaaggagagtcagacagag
tctacgaatgctatcctggagatgcagtatccaaaggtgcagaaatactgtctgatgagt
gtcaagggctgctacacagatttccacgtggacttcggtggtacttctgtgtggtaccat
atccaccgagggggaaagatcttctggctgatccctcctacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacatttttcttggggacagagtgtca
gagtgccagcgcattgagctcaagcagggctacacgtttgtcatcccctcaggttggatc
catgctgtctacactcccatggacacgctggtttttggaggcaacttcttacacagcttc
aacatccctatgcagcttcggatctacagcattgaagaccgcacgcgggtcccaaataag
tttcgttatcccttctattacgagatgtgttggtacgtgctggagcgttatgtctactgc
atcaccagccgctcacatctgaccaaggacttccaaaaggaatcgctcagtatggacatg
gagctgagctcctcggagtcagtaaacatggaagaggaggaggaggaagaagaggaggag
gatgcagcagggaaggaacccaggcgaccagtcacaaggcggtccattctcaccagcccc
atagccaatggtgccaatgtggactatgatgaactgggcaggagctgccggagcagcctg
ccaggtctgaagaagaccccatctatagactcttccgactccagccggggctcccaaaac
ggccaggcctgggacccgaacggtggcagcccacgcaagaacaggaaggtgcacctgacg
cagtttgagctggaggggctgcgctgcctcgtggacaaactggagtcactccctctgcac
aagaagtgcgttcccaccggcattgaggatgaggacgccctcatcgctgacgtcaagctg
ctgctagaagaatacgcaaacagcgaccccaaactggcacttacaggcatccccatcgtc
cagtggccccagagagataagctaaagctccaggcccggctgagggtgcgcctgcccacc
atccccatcaccaagccacacaccatgaagccaaccccccgcccgacacccgtcaggcct
acagtctctcccatcgtgtcaggcgccaggcggaggcgggtgcggtgccgaaaatgcaag
gcttgcatgcagggcgagtgtggcatgtgccactattgtagggacatgaagaagtttggc
gggcctggccgcatgaagcagtcctgcgtcctccggcaatgcttagcgcccaggctgcct
cactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcgcaggacttt
gagaagaagctcatggagtgctgcatctgcaatgagattgttcaccctggctgcctgcag
atggatggggaagggctgctcaacgatgagctccctaactgctgggagtgccccaaatgc
taccagggtgacgacgcagagaagggccagaagcggaaggtggaggagagcgatgatgac
acggcgcaagccaaggtgctgcggcccctgcggagttgcgaggagcccctgaccccccca
cccaactcgcccacccccatgctgcagctgatccacgacccagcgtcaccgcgaggcgtg
gtgacgcgctcgtccccgggagccggccccagcgaccaccacagcgccagcagagacgag
cgcttcaagcgacggcagctgctgcggctccaggctaccgagcgaaccatggtgcgggag
aaggagaacaaccccagcggcaagaaggagctgtcggaggtggagaaggccaagctgcac
ggctcctacctcacggtgacgctccaacgccccaccaaagacgtccacggcacttctatc
gtccccaagctgcaagccatcacagcctcctccaccaacctgcagcactctccccgcgtg
gtcatgcgccacacacccaccaggatgcccctgcggggcgggggggaggaggaggcagcc
gctgaggaggaggaggaggaagacgaggaggaggacgagaacgcggaggaggggggggcg
gcccggctcaatggccgagggggccgggcgcaggagggcgaggagagctggatgcagcgc
gaggtgtggatgtccgtcttccgctacctcactcgcagggagctctgcgagtgcatgcgg
gtgtgcaagacctggtacaagtggtgctgtgacaaaagattgtggacaaagatagatttg
agcagatgcaagtccatcaccccccaggcgctgagcggcatcatcaaaagacagccggtc
agcctcgacctcagctggaccaatatctccaaaaaacagcttacgtggctcgtcaacagg
ctgccaggcctgaaagacctcatcttagcgggctgttcctggtctgcggtctgtgctctc
agtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatcaag
gaccctcagatccgggacttactcacgcctccgacagacaaacccagtcaggacaatcgc
agcaaactccgcaacatgatcgatttccggctcgccggcctggacatcaccgacgccacg
ctgcggctgatcatccgccatatgcccctgctctcccgcctcgacctcagccactgcaac
caccttacggaccagtcagccaacctcctcacggccgtgggctcttccacacgcaactcc
ctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttgctgtacctg
cgccgcatctccaacgtcactctaatcgacctgcgaggttgcaaacagatcacccgcaaa
gcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctgtccgatgag
aagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
