Ciconia boyciana (Oriental stork): 140653614
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Entry
140653614 CDS
T10948
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04115
p53 signaling pathway
cboy04210
Apoptosis
cboy05164
Influenza A
cboy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
140653614 (APAF1)
04115 p53 signaling pathway
140653614 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
140653614 (APAF1)
05168 Herpes simplex virus 1 infection
140653614 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
APAF1_C
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WHD_APAF1
Beta-prop_WDR36-Utp21_1st
NB-ARC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
CARD
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
CARD_2
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
eIF2A
Ge1_WD40
WD40_like
Tricorn_2nd
PEP5_VPS11_N
Beta-prop_ACSF4
Beta-prop_RSE1_2nd
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
AAA_16
VPS8_N
nSTAND6
AAA_22
WHD_Dark
LRRC37
DUF2415
Motif
Other DBs
NCBI-GeneID:
140653614
NCBI-ProteinID:
XP_072721980
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All DBs
Position
1:53184327..53223185
Genome browser
AA seq
1298 aa
AA seq
DB search
MDVKSRNSLLKNRQALEKDIKTSYIMDRMISDEVLTLQEEEKVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAFSSGNGKSSMDGMTSYVKTILCEGGVP
QRPVVFVTRPKLVDAIKQKLCCLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLENDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNVVNQYKKYYKLNTPVPSQEDC
MYWYNFLAYHMAGANMQQELHDLMFSLDWIKAKTELVGPAHLIHEYVEYSSILDQKNSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPEASEVYQQAKLHAQRETGAFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDKQRIASCGADKTLQVFKAESGERLLEISAHDDEILC
CAFSADGEFVATCSADKKVKIWNSRTGRCRCVYEEHSEQVNCCQFNNRSGQYLLATCSND
TFIKRSCKSLCLCKMEVKYSYDLISRWKEEAFVLTSWMSQELHLLYETDTLEQLWDLNKK
YCRNTMMGHVNSVNHCRFSPNDECVASCSTDGTVKLWETRSANELKSIEIKDFFKNADEE
PDDVEVLVKCCSWSRNGDMILVVAKNKLLLFDVKTCDLLTQVIISHHSTIQYCDFCPGDE
LVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSDDQTIRIWETKK
VCKSSDAVLKSELDVVFHNGEVMILAIYNQKHLQLINGNTDSVIMQTAAQESPISCCCLS
EDLKFAAFGQESGTIKVLQLLDGKVLKSREAYRTSVQHCRFTSDCHTLISSAHDSVIQVW
NWQLSECVFLRGHKEAIKDFRLLENSKLLSWSFDGTVKVWNITTGNIEKDFSCHGGTVLS
CAVSPDGSKFSSTSADKTAKIWSFESSSVLHELKGHEACVRCCTFSPNNKLLATGDDKGE
IRIWDILTGALLHFCSPVTVDEEEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWNVTTGES
LQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKL
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagagtagaaatagtttacttaagaatcgccaagcattggaaaaagacatc
aagacctcttatattatggatcgtatgatttctgatgaagtgctgacattacaggaggag
gagaaagtgaaacaacagaatacccagaaggagcgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatccttttataatgcactgcttcatgaagggtac
agagatcttgccgctcttcttcaggatggcatccctgccttctcctctggtaatggaaag
agttcaatggatggaatgacttcatacgttaagacaattctctgcgaaggaggtgtacca
cagagaccggttgtgtttgtcactcggccaaaactggtagatgctattaaacagaaactg
tgctgcttgggaagtgatccaggctgggtcacagtttatggaatggcaggttgtgggaag
actgttttaacagcagaagctttaagggatcatcagctcttggaagattactttccagga
ggagttcactggatctctgttggaaaacaggacaaagcagggctcctaataaaacttcag
aatctctgtagtagattagaaaatgactctactctttcacaaaggccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgctacgcaaatatcccagatctcttttg
gttctggatgacatttgggattcctgggtattaaaagcatttgataatcaatgtcaggtt
cttatcaccagcagggacaggagtgtaacagatgctgtggctggcaataaatatgaggtt
catgtggaaagtggactagcacatgagaaaggactggagattttatccctattcgtgaat
atgaaaatatcagaactgccagaacaagctaactgccttgtaagggaatgcaaaggttct
cctcttgtgatatccttgataggtgcattattacgagacttccctagtcgttgggaatac
tatctcaaacagctgcagaataagcagtttaaaagaataagaaaatcttcttcttatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaactgaatgacaattataaa
gactactataaagacctctctatccttccaaaagatgttaaagtacctaccaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatcgctattgttctgtgatcgtaatgggaagtcattccattattatttacatgatctt
caacttgactttcttacagagaagaatcgcaaccagcttcaggagctacataaaaatgta
gtaaatcagtacaagaaatactacaaacttaatacgcctgttccatctcaagaggattgc
atgtactggtataactttctagcgtatcacatggctggtgccaacatgcagcaggaactc
catgatcttatgttttctctagattggattaaagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaagaatagcacagta
cgtgagaacttccaggaatttctgtctttaaacgggcaccttcttggacggcaaccattt
cctgacattatacagctgggtctttgccaaccagaggcatcagaggtgtatcaacaagcc
aagctacatgctcaaagagaaacaggagcattttatttggagtggataaataaaaaatcc
ttgaagaacctctaccgtctggttgttcgtccacatagagatgcagtttaccatgcctgc
ttttctaaggataaacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggagataagtgctcatgatgatgaaatactttgt
tgcgctttctctgcagatggtgaatttgtagcaacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggccgttgtaggtgtgtatatgaagaacactcagagcaggtc
aattgctgccagttcaataacagaagtggtcagtatcttttagccacctgttcaaatgac
actttcatcaaaaggtcttgcaagagcttgtgtttgtgtaaaatggaggtaaaatacagt
tatgatctgatatcaagatggaaggaagaagctttcgtgctgacgtcctggatgtctcag
gagttgcatttgctgtatgagactgacaccctggaacagctttgggacttgaacaaaaag
tattgtagaaatacaatgatgggtcatgtaaattccgtcaatcactgtagattttcacca
aatgatgagtgtgttgctagctgctcaacagatggaacagtaaagctttgggaaacacgc
tcagcaaatgaactgaaaagtattgagataaaagatttcttcaaaaatgcagatgaggaa
ccagatgatgtggaggttttagtaaaatgttgctcttggtccagaaatggtgacatgatt
ttggtggtagccaaaaataagcttttgctttttgatgttaaaacatgtgatttgttaaca
caagtcatcataagtcatcacagtaccatccaatactgtgacttttgtcccggtgatgag
ttagtagcagttgctttgtctcactgttctgttgagttatggaatattaaatctttatca
aaagtagcgtattgcaggggacacatgagctgggttcactgtgtgacattttcaccagat
ggatcattatttctgacatcatctgatgaccagacaatacgcatttgggaaacaaagaag
gtgtgcaagtcttctgatgctgtgctaaaaagtgaactagatgttgtatttcacaatggt
gaagtgatgattttagcaatttacaatcagaagcatttacaacttatcaatggaaataca
gacagtgttattatgcagacagcagctcaagaatcccccatttcctgctgttgcttaagt
gaagatcttaaatttgcagcttttggacaggagagtggaacaataaaggtattacagttg
ttggatgggaaagttctgaagtcccgggaggcctacaggacatccgtgcagcattgtcga
tttacctctgattgtcatactctcatttcaagtgctcatgattcagttatacaggtatgg
aattggcagctgagcgaatgtgtgtttctaagagggcacaaggaagcaatcaaggatttt
agacttctggaaaattcaaaacttctttcttggtcatttgatggaaccgttaaggtttgg
aatatcactactggaaacatagaaaaagatttttcttgccatggaggtactgttctttcc
tgtgctgtttcacctgatggtagtaaattttcatctacttctgctgacaaaactgcaaag
atatggagctttgaaagttcatctgttcttcatgagctgaaaggtcatgaagcctgtgtg
cggtgctgtactttctctcctaataacaaattattggccactggagatgacaaaggagaa
ataaggatttgggacattttaacaggtgcattacttcacttctgctccccagttactgta
gacgaagaagaaccaacacatggtggttgggtaacagacctctctttttctcctgacagt
aaaatgcttgtgtcatctggaggctatcttaagtggtggaatgtaactactggagagtcc
ttacaaaccttctacacaaacggaacaaacctgaagtcaatacatgtgtcccctaatttc
aaagtgtatgtgactgttgataatcttggtattctttatgtattacagaagttgtga
DBGET
integrated database retrieval system
