Ciconia boyciana (Oriental stork): 140654498
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Entry
140654498 CDS
T10948
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04514
Cell adhesion molecules
cboy04520
Adherens junction
cboy04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
140654498 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
140654498 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
140654498 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cboy01009
]
140654498 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cboy04515
]
140654498 (PTPRF)
Enzymes [BR:
cboy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
140654498 (PTPRF)
Protein phosphatases and associated proteins [BR:
cboy01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
140654498 (PTPRF)
Cell adhesion molecules [BR:
cboy04515
]
Immunoglobulin superfamily
Type II RPTP family
140654498 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
DSPc
V-set
Y_phosphatase3
C2-set_2
PTPlike_phytase
Fn3_VIN3
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
140654498
NCBI-ProteinID:
XP_072723922
LinkDB
All DBs
Position
7:complement(12783301..13176915)
Genome browser
AA seq
1892 aa
AA seq
DB search
MVPNFCVPELTVPVAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHE
VMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSANYTCVAIS
SLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSLEGQ
FQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQA
RMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITK
YELLYWEGEDGAQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTIEARTAQ
STPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQETVIGGLLPETT
YSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPPKEMVGELLG
YRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEEFEKEITTAE
DVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQDLVNITKDTS
ITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQVFAKNFRVNAVMKTSVLLSW
EVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSSAGGLQHLVS
IRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVVPADQSTSSPTARWRT
PDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDELPETFTLGDEKNYKGFYNKPL
SQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMGPVLAVILII
IIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGMRDHPPIPVT
DLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILT
SIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVMMTRLEEK
SRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTFALYKNGSSEKRELRQFQFMAWP
DHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVD
IYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHIQKLTQVPPGES
VTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYI
NASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPA
ECSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGF
IDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLR
TQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcgtcccagaactcactgtgccagtagccatcctctgctgcttg
atgctgcctttagcaggagcagacagcaagccaacattcatgaaagctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacatggatgaagaaggggaagaaagtcagttctcagcggtttgaggttattgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgtgttcatcgagatgaa
gctatctatgagtgcacagcaaccaatagtgttggggagataaacacgagtgccaaatta
acagtgttagaagaagaccacctcccagctggcttcccgaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacaatgctctgtgctgccagcggtaaccct
gatcctgaaatctcctggttcaaggacttcctgcctgttgacactgcaactagcaatggg
cgaatcaagcagctccgctcgggagctctgcaaatagagaacagcgaggagtcagaccaa
ggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgctactctgccccagctaac
ctttacgttcgagtgcggcgtgttgctcctcgattctctatccctccgagcaaccacgag
gtgatgcctggggggagtgtgaacctcacatgcgtggcagtaggtgctccgatgccctat
gtgaagtggatggctggtgtggaggaactgaccaaagaggatgagatgcccgtcggtagg
aatgtcctggagctgaataacatcgtgcagtctgccaactacacctgcgtggccatctcc
tccctcggcatgatcgaagccacagcccagatcactgtcaaagcactgccaaaacctcca
acagagccattagtgactgaaacgacagctaccagcgtgaccctcacctgggattcgggc
aactctgaccccatttcatattatgtcatccagtacaagcccaaatccttggagggtcag
ttccaggaggtggatggtgtggcaacaacccgctatagcataggtgggctcagccccttc
tcagagtatgagttccgggtcatcgcagtcaataacattggcaggggtccccccagtgag
ctggtcgaggcccggacaggagagcaagctccttcaagtccacccctcaaagtccaggca
cggatgctgagcgccagcaccatgctggtccagtgggagcagccggaggagccaaacgga
cagatccgagggtaccgtgtttactataccactgacccacatctgcctttgagcatgtgg
cagaaacacaacactgacgacagccacctcactactgtgggaagcctcatcacagggacc
acgtacagcatccgcgtcctggcctttacttcagtgggcgacgggcccccctcggacatc
atccaggtcaaaacgcagcaaggggttcccgcccagccagctgacttccaggcagaagca
gagtctgatacccgcatcctgttgacgtggctgcctgcctctcaggaacgcattaccaaa
tacgagctgctgtactgggaaggggaggatggcgctcagcaaaaggtggagtttgaccca
acctcctcatatgctgtggaaggtctcaaaccagacacgctgtataagttccgtctgggt
gcccgctcagagctgggggtaggagtctacaccccgacgatcgaagccagaactgcccaa
tccaccccttctgccccaccccaagaagtcgagtgtgtaagcaccagctccactaccatc
cgggtaagttgggtgccaccgcctgcccagagccgcaatggggtcatcacccagtactcc
attgcgtaccaggcagtggaaggagatgacaacaccaagcatgtagtggatggcattgga
cgggagcactccagctgggagatcaaggacctggagaaatggaccgagtacaaggtgtgg
gtaagggctcacaccgatgtggggccaggaccggagagcatccccgtgcacgtgcgcact
gacgaggatgtgcccagtgccccaccacgaaaggtggaggtagagtctgtgaattcgact
gccatccgggtgagctggaagctgcccatctccaacaagcagcacgggcagatccgcggg
taccaggttacctatgtgaagctggaaaacaacgagccccgagggcagccagtgatcaag
gacgtcatgctgtcagaagcacaggagacggtcattggaggcctgctgcccgaaaccacc
tactcagtcacagtcgctgcctacaccaccaagggagatggtgcccgcagcaagccgaaa
gtcatcaccaccacaggggcagtcccggggaagcccaccatgatgattagcacgacagcc
atgaacacagccctcatccagtggcacccacccaaggagatggtaggggagctgctgggt
taccggctgcagtacagacgtcttgatgaggaaaagatgaacacgatagacttcgggaag
agagaccatcactacactgtgaccaacctgcacaagggggccacgtacctcttcaaattg
tctgccaagaacagagctggcccaggagaggagtttgagaaggagatcactacggcggaa
gacgtgccaagcggcttcccacagaacctgcgcgtggtgggtctcaccacttcaaccaca
gaagttgcatgggaccccccggtcttggcagaaagaaacggcaagatcgtcaactacaca
gtggtatacagggacataaatagccagcaggacctggttaacatcaccaaggacacaagt
atcactttgacgaatttgaagcccgataccacttacgacatcaaagtgagggcccgcacc
aataagggggttgggccgctcagccccagcatccagtcccggaccatgcctgttgagcaa
gtgtttgctaagaacttccgcgtcaatgccgtcatgaaaacgtctgtgttgctgagctgg
gaagtgcctgactcctataaatctgcagtgccttttaagattctgtacaatagccagagt
gtggaggtggacggccactcaatgaagaaactcataagtgacctccagccagacacggac
tattcttttgtgctaatgaaccgcgggagcagtgctggggggctccagcaccttgtctca
atccgcaccgctcctgacgtcttgcaaagcaaacccatcgccacaaacaagtacatacag
gaaggaaaattcacgctcacccttcccaaagtccagaccactgtgccagttaggtggtac
tacatcgtggttgtgccagcggatcagagcaccagcagccctactgctcggtggcggaca
cctgatgagatggagctggaccagctgctggaggccataagccaagggagtcagagcagg
cgccagcgacgccaagcagacagactcaagccctacattgctgctcaagtggatgagctg
cccgagaccttcaccctgggggacgagaagaactacaaaggtttctacaacaagcccctg
tctcaagacctgagctatcgctgctttgtgctggcctcactggaggatggagacacgaag
agatatgcagccagcccctactcagatgagatcgtgatggaagtagcttcagcgaagcag
caggatgaaccagagatgctgtgggtgatgggacccgtcctggccgtgatattaatcatc
atcattgtcattgctatacttctcttcaaaaggaaaagggcacactccccctcttccaag
gatgagcactccatcggcctgaaggactcgctcttggcccactcctctgacccggtcgag
atgagacggctcaactaccagactccaggcatgcgcgaccacccccccatccccgtgaca
gacctcgccgacaacatcgacaggctgaaagccaacgacgggctgaagttctcccaggag
tacgagtccattgatccggggcagcagttcacctgggagaactccaacctggaagtgaat
aaaccaaaaaaccgctatgcaaacgtgatcgcctatgaccactcacgggtcatcctgacc
tccatcgatggagtcccaggcagtgattacatcaatgccaattacattgatgggtatcgg
aagcagaacgcctacatcgccacgcagggccctctgccagaaaccctcagcgacttctgg
aggatggtgtgggaacagagaacagcaactatagtcatgatgaccaggctggaggagaag
tccagggtaaagtgtgaccagtactggccgagccggggtacagaaacctatgggatgatc
caggtgaccctgctggacacagtcgagctggcaacctacaccgtccgcacctttgcactg
tacaagaatggctccagtgagaagcgagagctgcgacagttccagttcatggcttggccc
gatcacggggtgccagaatatcccaccccgatcctagctttcctgcgacgggtcaaggcc
tgtaatccaccggatgcggggcccatggttgtccattgcagtgctggcgtgggccgaaca
ggttgcttcattgtcattgatgccatgctggagcggatgaagcatgagaagaccgtggac
atctatggccacgtgacatgcatgcgctctcagcgcaactacatggtgcagacagaggac
cagtacatcttcatccatgaggccttgctggaggcagccacatgtggcaataccgaggtg
cctgcacgcaacctcttcgctcacatccagaagctgacccaggtgccaccaggcgagagt
gttactgcaatggagctggaattcaagctgctggccaactctaaagcacatacctcacgt
ttcatcagtgccaacctcccatgcaacaaattcaagaaccgcctcgtgaacatcatgcca
tacgagctgacaagagtctgtctgcagcccattcgcggtgtggagggctccgattacatc
aatgccagcttcatagatgggtacaggcagcagaaggcctacatcgccacgcagggacca
ctggccgagaccacagaggatttctggcggatgctctgggagcacaactccaccatcgtg
gtgatgttgacaaagctgcgcgagatgggccgggagaagtgccatcagtactggcctgcg
gagtgctctgcccgataccagtactttgtggtggaccccatggcagagtacaacatgcca
cagtacatcctccgggagttcaaggtgacggatgccagggacggccagtcacggaccatc
cgccagttccaattcacagactggcctgagcagggagtgccaaagacgggagagggcttc
attgacttcatcgggcaggtgcacaagaccaaggagcagtttgggcaggacgggcccatc
acagtgcactgcagcgctggggtcgggcgcacaggcgtgtttatcacactcagcatcgtg
ctggagaggatgcgctacgagggggtggtggacatgttccagacggtgaagaccttgcgg
acgcagcggccagccatggtgcagacagaggaccagtaccagctgtgctacagagcggca
ctggagtatctcggcagcttcgaccactatgcaacgtaa
DBGET
integrated database retrieval system
