Ciconia boyciana (Oriental stork): 140656062
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Entry
140656062 CDS
T10948
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
140656062 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140656062 (TDG)
Enzymes [BR:
cboy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
140656062 (TDG)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
140656062 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
140656062
NCBI-ProteinID:
XP_072727393
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All DBs
Position
1:complement(62382355..62396105)
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AA seq
408 aa
AA seq
DB search
MEAEELGRYYAYLQQAQAFYTFPFHQMMTAAPNMEIMTEQPTLEGIPEPNIAQEPPKEVK
KGGRKRKAKATEPKQPKKPAAKKEKSAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTK
TLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLTHMDDHTLP
HKYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEV
FGIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGI
APNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYESEQCHFSSN
GTAASNPQYCEGLSFGEVPNGQWMTQSFADQIPEFNAGMTREEEGSSA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggagttgggcagatactacgcgtatcttcagcaagctcaagctttttac
acatttccgttccatcaaatgatgactgcagcgccgaacatggaaatcatgactgagcag
ccgactctagagggcattccagagccaaacattgctcaggagcctccaaaagaagttaaa
aaaggaggaaggaaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgct
gctaaaaaagaaaaatcagccaagtcaaaaggcaaacaagaaaagatcacagacactttt
aaagtcaaaagaaaagtggaccgttttaatggtgtatctgaagctgaacttctgaccaag
actttacctgatattttgacctttgatctggacattgtaataattggcataaaccctggc
ttgatggcagcttacaaaggacatcattaccctggacctggaaaccatttttggaagtgt
ctgttcatgtctggtctaagtaatgaacagctgacccatatggatgaccacaccttgcca
cataaatatgggattggatttacaaacatggttgaaaggacaacacctggaagcaaagac
ctgtccagcaaagagttccgggaaggagggcgaattctgatgcagaagttacaaaagtat
aaacctcgtatagcagctttcaatggaaaatgtatttatgaaatttttagtaaagaagtt
tttggaataaaagttaagaatttggaatttggactgcagccacacaaggtgccagacaca
gaaactctctgctacgttatgccatcatccagcgcaagatgtgctcagtttcctcgcgcg
caagataaggttcattattacataaagctgaaagacttaagggatcaactgaaaggcatc
gcaccaaacacagaggtgcaggaggtgcagtacacatttgacttgcaacttgcacaagag
gatgctaaaaagatggctgtcaaagaagaaaaatacgatccaggttatgaagcagcgtat
ggaggagcttactgtgatcgtgcaccgtatgaaagtgaacagtgccatttctcttcaaat
ggaactgcagcgagcaatccacagtactgtgaggggttgtcctttggtgaagttcctaat
ggacaatggatgacccagtcctttgcagatcagattccagagttcaacgctggtatgacg
cgggaagaagagggaagcagtgcgtag
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