Ciconia boyciana (Oriental stork): 140657122
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Entry
140657122 CDS
T10948
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy04010
MAPK signaling pathway
cboy04020
Calcium signaling pathway
cboy04510
Focal adhesion
cboy04518
Integrin signaling
cboy04519
Cadherin signaling
cboy04540
Gap junction
cboy04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140657122 (PDGFRB)
04020 Calcium signaling pathway
140657122 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
140657122 (PDGFRB)
04519 Cadherin signaling
140657122 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140657122 (PDGFRB)
04540 Gap junction
140657122 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
140657122 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cboy01001
]
140657122 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cboy04090
]
140657122 (PDGFRB)
Enzymes [BR:
cboy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
140657122 (PDGFRB)
Protein kinases [BR:
cboy01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
140657122 (PDGFRB)
CD molecules [BR:
cboy04090
]
Proteins
140657122 (PDGFRB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
VEGFR1-3_N_Ig-like
Ig_2
Ig_VEGFR-1-like_5th
V-set
VEGFR-1-like_Ig-like
C2-set_2
BACON_2
Motif
Other DBs
NCBI-GeneID:
140657122
NCBI-ProteinID:
XP_072729804
LinkDB
All DBs
Position
9
Genome browser
AA seq
1169 aa
AA seq
DB search
MACPRITVLERGRGKISTRAGGEERMVMESWDFTSAAARLMLSEGGCSEDTFIYSLSFTS
VLSALPRFSHQATEPAMLSPSLKTSLWLLILTGLLEVTSGGSGLHIEPGDAELVLGLHST
FSLLCYGDAALVWEREGQSLAASLEHRDGVFLSNLTLRNVTGHHTGEYACTYSPDQAPEP
AERKALYIYVPDPSLVFLPTITSEEVFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPI
PAAYDPQQGFKGFFEDKTYFCRTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTIVRQGE
NITLMCTVSGNELVNFDWDYPRKQAGKAVEPVTDFLPGSTHEIRSILTIQNVELEDSGTY
VCNVSEGYHEKTDRKDITVQVIERGFVRFHTRLPSMVYAEVHKSHTIQVEVEAYPQPSIM
WLKNNKTLTMESSSEFTITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSF
HLQINVPAKVVDLKENSSASSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLG
NESAEIGLQTNTTYHAELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHAL
PFKVVIISVILALLVLTVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLP
YDSSWEVPRDKLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQAL
MSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGEKA
RREAEVYGNTAKEDHVQSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSN
YGTPYELDSYSPSAPERTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLA
ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWS
FGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIR
PSFSQLVVLMGNLLVDCYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNTRLTPSSPASS
ILYTAVHQNGGENDYIIPLPDPKPEAICDLPQEASISRASSTLNEANTSSTISCDSPLGL
RQDEEQESDPQPGCQELTTGHQEVEESFL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcttgccctcgcatcacggtgctggagaggggcagagggaagatctctactcgtgct
ggtggggaggagaggatggtgatggagagctgggacttcacctcggcggctgcaaggttg
atgctctctgagggtgggtgcagtgaggacacattcatttacagcctgagtttcacctcg
gtcctttcagctcttccccgattcagccaccaagccacagagcccgccatgctgagcccc
tctctgaagacatctctctggctcctcatcctcaccggtctgctggaggtaacgtctggg
ggcagcgggctgcacatcgaacccggagatgctgagcttgtcctcggcctccacagcacc
ttctccctcttgtgctatggggacgccgccctggtctgggaacgggagggtcagtccctc
gccgcctcgctggagcacagggatggtgtcttcctcagcaatctcaccctcaggaacgtg
acgggccatcacaccggggagtacgcgtgcacctacagccctgaccaggctccagagcca
gcggagaggaaagccctgtacatctacgttccagatccctccctggtcttcctccccaca
atcacctccgaagaggtcttcatcttcatcacgggctacacagaggccgtcatcccatgt
cgtgtgaccaacccgcagatgcaggtgaccctctatgagaaaaaggtggagaaccccatc
ccagctgcttatgacccacaacaggggttcaaaggcttctttgaggataagacctatttc
tgccggacaattgtggatgaccaggaggtggattcagacaccttctatgtctacaggatc
caggtctcatctgtgaacgtctccatcagcgcagtgcagaccatagtgcgtcagggagaa
aacattaccctgatgtgcactgtgagcggcaatgagctagtcaacttcgactgggattat
ccccgcaagcaagcagggaaggctgtggagccggtgaccgacttcctgcctggatccacc
catgagatccgctccatcctcaccatccagaatgtggagctggaggacagcgggacctat
gtctgcaacgtctctgagggctaccatgagaaaacagatcggaaagacatcacggtccaa
gtgatcgagcgtggcttcgtgcgcttccacacccgcctgcccagcatggtgtacgctgag
gtccacaagagccacaccatccaggtggaggtggaagcctacccgcaacccagcatcatg
tggttgaagaacaacaagacgttgaccatggagagcagcagcgagttcaccatcaccagc
aggaacctgtcagaaaccaggtaccagacggctctggtgctggtgcgggtgaagcaggaa
gaaggaggattttacaccatccgggcttccaatgaggacgatgagcaggagctgtccttc
catctgcagataaatgtgccagctaaagtggtggatctcaaggagaacagcagtgccagc
agtggggagcagaccgtaacatgctctgctgaaggcatgccccagccagagatcagctgg
tctacttgcagcgacataaaatggtgcagcaccaaggggcagcccacccggctgctgggg
aacgagtctgcagagattggtctgcagaccaacaccacgtaccatgcggagctgcaggtg
taccgcgtgaacagcaccctgcagctgcacagggtggacgagcccctgctcctgagatgc
actgtgcaaaacttcctgggcaccaactcccaggacatcactctggtcccacacgccttg
ccgttcaaagtggtcatcatctctgtcatcctggccttgctggtcctcaccgtcatctcc
ctgatcatcctgattgtcctgtggcagaagaaacctcgttatgaaatccgctggaaggtg
attgagtcagtcagctccgatgggcacgagtacatctacgtggatcccatgcagctccct
tacgactccagctgggaggtgcccagggacaagctggtgttaggacgcactcttggctcc
ggtgcctttggacgcgtggtggaggcaacagcccacggcctgagccattcgcagtccacc
atgaaagtagcagtcaaaatgctcaagtccactgcccgaagcagcgagaagcaagccctc
atgtccgagctgaagatcatgagccacttgggacctcacctcaacatcgtcaacttgctg
ggggcctgcaccaaaggagggcccatctatatcatcaccgagtactgccgctatggggat
ctggtggactacctgcaccgcaacaagcataccttcctgcagtcctacggagagaaggca
cggcgagaggcagaggtgtacgggaacactgccaaggaggatcacgtgcagagtcacctc
tccttgtctgtggagagcgacgggggctacatggacatgagcaaggatgactccctggat
tatgtgcccatgtccgacatgaagggtgaagtcaagtatgctgacatcgagtcctctaac
tatggcaccccgtatgagctggacagctattccccatcagctcctgaaagaacagaccgg
gtgacgctgataaacgagtctccgctcctcagctacatggacttggtgggcttcagcttc
caggtggccaatgggatggagttcctggcttccaaaaactgtgtgcatcgtgacctggct
gccaggaacgtcctcatctgcgaggggaagctggtgaagatctgtgactttggcctggcg
agagacatcatgagggattccaactatatctccaaaggcagcaccttcttgccccttaag
tggatggctccagagagcatcttcaacaatctctataccaccctgagcgatgtgtggtcc
tttgggattctcctctgggagatattcactctaggggggactccataccccgaactgcct
atgaacgaacagttctacaacgccatcaaacgtggctatcggatgtccaaacccacccac
gcctctgatgaaatctacgatatcatgcagaagtgctgggaggagaagtttgagatcaga
ccatccttctcacagctggtggtgcttatgggaaacctcttggtggattgctacagaaag
aggtaccagcaggtggatgaagagttcatgaagagtgaccaccctgctgttgtccgcaca
agacccacaatccctgggctgaacaacaccaggctcactcccagctcccccgccagcagc
attctctacacagccgtgcaccagaacgggggcgagaacgattatatcatccctcttcct
gaccctaaacccgaggcaatctgcgatctccctcaggaggcctccatcagccgggccagc
tctacactgaatgaggccaacacatcgtctacaatatcctgtgacagccctctgggcctc
cggcaagacgaggagcaggaatccgacccacagccaggctgccaggagctgaccacaggg
caccaagaggtggaggagagtttcctgtag
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