Ciconia boyciana (Oriental stork): 140662377
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Entry
140662377 CDS
T10948
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03440
Homologous recombination
cboy03460
Fanconi anemia pathway
cboy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140662377 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
140662377 (BRCA1)
03460 Fanconi anemia pathway
140662377 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cboy01009
]
140662377 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cboy04121
]
140662377 (BRCA1)
03036 Chromosome and associated proteins [BR:
cboy03036
]
140662377 (BRCA1)
03400 DNA repair and recombination proteins [BR:
cboy03400
]
140662377 (BRCA1)
Enzymes [BR:
cboy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140662377 (BRCA1)
Protein phosphatases and associated proteins [BR:
cboy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140662377 (BRCA1)
Ubiquitin system [BR:
cboy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140662377 (BRCA1)
Multi subunit type E3
BRCC complex
140662377 (BRCA1)
Chromosome and associated proteins [BR:
cboy03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
140662377 (BRCA1)
DNA repair and recombination proteins [BR:
cboy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
140662377 (BRCA1)
BRCA1-A complex
140662377 (BRCA1)
BRCA1-B complex
140662377 (BRCA1)
BRCA1-C complex
140662377 (BRCA1)
BRCA complex
140662377 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
140662377 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
BRCT_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_6
BRCT_3
zf-Nse
zf-RING_5
zf-ANAPC11
RTT107_BRCT_5
zf-RING_10
Zf_2nd_IFT121
TRAF3_RING
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
140662377
NCBI-ProteinID:
XP_072741863
LinkDB
All DBs
Position
22:274072..333753
Genome browser
AA seq
1864 aa
AA seq
DB search
MDFSVIAIGDVQNVLSAMQKNLECPICLDVVEEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKLLNSHRFPKTSTEATAAEF
LCKESSVIQSKGFRNRKKNAKENGQENCTLQEANVDTQLTDTRVKRCPLRNKTQKCDSEK
GICIEFGSDSSEEFFKQASNTGLEDKEVLQISSQEKLEELKSAEKRNEYSCNTQPDRLGA
KEIILPNVIGESDFLKEGLNKKSTRSITEYAKPGQVNMTEYQSSPLNVLAVDLFTEQCDR
IGNATPLRNGDSSFFKNTEGMDAEQTQCNSKSKEFDLKDSSESRLDKSKEIDIVVQSVEA
VEMYEPENDSFHEKELPLEKLLQPETLHCATLNQVSRKRLKRSIQKVNEWFSKSNEILSS
NSSQDDSAGVMDVSGEGDTCLSDKDSCISEKTDPMVDSMEIGVAEGNKRWSKQTADSIKD
KIFGKTYKRERKSNPPIILREILPTTKKEDVATDERCLNNSSKDGLKRKRKTACVLQPED
FIKKKDIEEADGCPQSVNLCLGDAEKKRCDESSAVKESHLSENREDNTLAELEVGGGSIR
KKATEKVTGKHCDGELELNNCDQKRTKKRSSAAKRCRRSTRTMCALQLAVDRNSVSPDPA
EPQIDSYPSSEEPRKVDSEQRQVRRSRRLQLLSEEMTKETGKGVVIKGARKYDSDHEGSF
FGDQRNVLVHTSECKDLCEPQGMLSYKPLANLKGGDLEANEIGISLKNSSDAAETGKSLF
NPTSSCQHSNCSSFAPDAGSQEGETLGSPFLLQSPSMTVVQTASHPTEEMTESYTTFPQD
SGCGTQNAPGDFRTEKLPMAKSVSELTKEAEDSELDTQYLRNIFRHSKRLSFSLYPTPMK
ACAVDAASETLKIPCADQVENKHSKYLKTGNFQEEKTTTESLSRVSEKEMLKTYVSACVS
PVACFVGNTERVHTGEHQEDVSQVANQGSLTPIRMGTARTEDKNRSQKGEQRNEKTLSTD
VGIESELRHNPIKSNRSQSDQSNTEEDIFKRTNLNTVNEIRFSSESNQAGKAKVGDSKGP
ILHFQSRSMICPATCQQRPAELSCEVTGKKSSKRERKQVKGNEEEATQTASTGMPECLVT
AALEEPLKGNSDFTGLSETPDGLLCSDDDIEENTSFSETDRKERSAVFVKRRDNALLEDL
HNRNVSSKPRFQGIQRSRRKAQKLQSSDEESSEDEDLPCFQTLIFGKSISTPLQVNKQVT
SVVESSVSPITLPHNGSHDDNNMQKMPEAAPSNGYVSPSQESECSVNLFSSQSNVSEESV
DRAQELKKSLIQVHTSKQVSNVNESKETFQSCNGGLKRSKTNFKDGCQEDPNMGPNLGEA
SGYDSETSNVEDSCGPFSQGEILTTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSRDCEFL
PIHRELPDSSSEGTLGMEQMRQERGVESTSEGNFENHKCSSSKGFSANDFHLLPSDSLNS
KMKELEKERSPELLLPSSKSCLLKRTDLEKGLQCDSVLKNKAPSEKTKPVEEAVQEHSQC
HLEAGEQKSGTRLNSASVLSNLSGNVTRSPNSSSSSVRLLNPRTAEATNSSVVAQNANKS
CAQQCKLKRSVCFPVSVLHNAAGKENATSPVVTNKKEMSIVASGLNQSEHLVVQKFARKT
QSTLSNHITEGTTHVIMKTDKELVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDEE
NFEVRGDVINGRNHHGPKRARQSLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGASVV
KQLHLFTHKTNSTSVVVVQPDAWMENTDYRAIQQKNNVAMVTREWVLDSVACYECQEFDA
YLVS
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatgtggtagaagagccagtttcaacaaaatgtgat
cacatattctgcaggttctgtatgttcaaactcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctatgcaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccatgcatttgagcttgacactggagta
aaattgttaaacagtcatcgctttcctaaaacatccacagaggccactgctgctgagttc
ctgtgtaaggaaagttctgtcatccaaagtaagggcttcagaaacaggaaaaaaaatgct
aaggaaaatggacaagaaaactgcaccttgcaggaagctaatgtggatacacagcttaca
gataccagggtcaaaaggtgtcccctaagaaacaaaacccagaaatgtgactctgaaaaa
gggatttgtatagagtttggctctgattcatctgaagagttttttaaacaggcaagcaat
actgggttagaagacaaagaagtgcttcagatttcatctcaagaaaagctagaagaactt
aagagtgctgagaagaggaatgaatattcttgcaatacacagcctgacaggctgggtgct
aaagaaataattctaccaaatgtcataggtgaaagtgatttcttgaaggaaggcttgaac
aagaaaagcactcggagcatcactgaatatgctaaacctggccaagtgaatatgactgaa
taccagagttctcctttaaatgttcttgctgtagacctattcacagagcagtgtgacaga
ataggtaatgccactcctttaaggaatggggactcatctttctttaagaacacagaagga
atggatgcagagcaaactcagtgcaatagtaaaagcaaagagtttgacttaaaagatagc
tcagagagcaggttggataaaagcaaggaaatagatattgttgtacaaagcgtggaagct
gtggaaatgtatgaacctgagaacgattctttccatgaaaaagaacttcctctggagaaa
ctacttcagccagagacacttcactgtgctaccctgaatcaagtctctaggaagagactg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaacgagattctgtcttcc
aattcttcccaggatgattctgctggagtgatggatgtttcaggtgaaggagatacatgt
ttatcagataaagattcctgtatttcagagaagactgaccctatggtagattccatggaa
attggagtggctgaaggaaacaagagatggtcaaaacaaacagcagatagcatcaaagac
aaaatatttgggaaaacatacaagagagagaggaagtcaaatccccctattatcttgaga
gagattttacctactacaaaaaaggaagatgtggctactgatgagaggtgcttgaataat
tccagcaaagatggactaaaacgaaaaaggaagactgcctgtgttctgcaacctgaggat
ttcatcaagaaaaaagatatagaagaggcagatggatgccctcaaagtgttaacttgtgc
cttggagatgctgaaaagaaaagatgtgatgaaagttctgctgttaaggagagtcacctc
tctgagaatagagaggataatacactagcagaacttgaggtaggaggaggatccatacgg
aaaaaagctactgaaaaggtgactggcaagcactgtgatggggagctagaactgaataac
tgtgatcagaaaaggactaaaaaaagaagttctgcagcaaaaagatgcaggcgttctact
agaaccatgtgtgctctacagttagcagtggatagaaactctgtttcccctgatccagct
gagccacagattgatagctatccaagcagtgaagaaccaaggaaagttgattctgagcaa
agacaagtcaggcgcagcaggaggcttcagttactttctgaagaaatgacaaaagaaaca
ggaaaaggagtagtaattaagggagcaagaaagtatgatagtgatcatgaagggtctttc
tttggagaccaaaggaatgtgttagttcacacttctgaatgcaaagacctgtgtgagccc
cagggtatgctgagttacaagccactagctaatctgaagggtggtgatctggaagcaaat
gaaatagggattagtctaaagaattcgtctgatgctgcagaaactggaaaaagtctcttc
aatcctacatcttcatgtcagcattcaaattgtagttcctttgcacctgatgcaggttct
caagaaggtgaaacactaggtagccctttcctcctacagtctccttcaatgactgttgtg
caaactgcttcccacccaactgaagagatgactgaatcatatactacttttccccaggat
agtggatgtggtacacaaaatgctccaggggacttcagaactgaaaagttgccaatggct
aaaagtgtttcagaattgaccaaggaagctgaagatagtgagttagacacacagtatctg
cgaaatatatttagacattcaaaacgcctatcatttagcctttatcctactcccatgaag
gcgtgtgcagtagatgctgcttctgaaactttaaagataccatgtgctgatcaggtagaa
aataagcatagcaaatacttaaaaacaggaaactttcaagaagagaaaacaactactgaa
agtttgagtagggtttctgagaaagagatgcttaagacctatgtatctgcttgtgttagt
cctgtggcttgctttgttggcaacactgaacgtgtgcacacaggggaacatcaagaagat
gtttcacaggttgcaaatcaagggagtctgacaccgataagaatgggtaccgctaggact
gaagacaaaaacagatcgcaaaaaggagagcagagaaatgaaaagacactgtcaactgac
gtagggatagaaagcgagttgagacacaatccaatcaaaagtaatagaagccaaagtgat
cagagtaatacagaagaggacattttcaaaagaaccaatttaaacacagtcaatgaaata
cgcttcagttcagaaagcaatcaagcaggaaaggccaaagttggtgacagcaaaggacca
atactacattttcagtccagatcaatgatttgtcctgcaacttgtcagcaaaggcctgct
gaactcagctgtgaagtcactggaaaaaaaagtagcaaaagagaaagaaaacaagtaaag
gggaatgaagaagaagcaacccaaactgctagcacagggatgcctgagtgtttggttaca
gcggctctagaagaacctcttaaagggaatagtgattttacaggtttgtctgaaacccct
gatggcttactgtgctctgatgatgatattgaagagaacaccagcttttctgaaactgat
aggaaagagagatctgctgtgtttgtaaaaagacgtgacaatgccctgctagaagacctg
cacaatagaaatgttagttctaagccaagatttcaaggtattcaaagatctcgaagaaaa
gcgcagaaactgcaatcttcagatgaagaatctagcgaggatgaagatttaccatgtttt
cagacattaatatttggcaaatcaataagcacacctttgcaggtcaataaacaagtgaca
tctgtggtagagtcttcagtaagtcccatcacgttgcctcacaatggaagtcatgatgac
aataatatgcagaaaatgcctgaagctgccccaagtaatgggtatgtttcaccaagccag
gagtcggaatgctccgtcaacttattttcttcccagtccaacgtgtctgaagaatcagtt
gatagagcacaagagctgaagaaatctttaatacaagttcatacatccaaacaagtgagc
aatgtgaatgagagtaaagaaacttttcaaagttgtaatggagggctgaagagaagcaaa
actaacttcaaagatggatgccaagaagacccaaacatgggaccaaacctaggtgaagca
tctggatatgacagtgaaacaagtaatgtagaagattcatgtggaccattctcgcagggt
gaaatccttactacacagcagaagaatgctatgcaaaataaccttaaaaaacttcagcaa
gaaatggctgtacttgaagcagtgctaaagcagcatggaagtcgggactgtgaattttta
cctatccatagggaactgccagattccagtagtgaaggaacacttggaatggaacaaatg
agacaagaaagaggggtagagtcaacctcagaaggaaattttgaaaatcataaatgcagc
agttcaaagggattttcagccaatgatttccatcttttgccaagtgattctctcaacagt
aaaatgaaagagttagaaaaagaaaggtctccagaattgttgcttccatcttctaaatcc
tgtttgttaaagagaacagatttggagaaaggcctacagtgtgacagtgttctgaagaac
aaagctccttctgaaaagacaaaacctgtggaggaagcagtgcaagaacatagtcagtgt
caccttgaagcaggtgagcagaaatctgggaccaggctaaacagtgcatctgtcttatca
aatctctctggaaatgtgacgaggagtccaaatagctcttcctcctctgtaaggcttctt
aaccctcgaactgcagaagcaacaaatagttctgtggtagctcagaatgccaataaaagc
tgtgctcaacaatgtaaattgaagagaagtgtttgttttcctgtatctgttctgcacaat
gcagctggaaaagaaaatgctacaagtccagttgtgactaacaagaaagaaatgtcaatt
gtggcatcaggtctgaatcaaagtgaacatttggtggtccagaagtttgcaagaaaaact
cagagcactttatctaatcacattactgaaggaacaacccatgtcataatgaaaacagat
aaggagctggtgtgtgaacggacactgaagtactttctgggtattgcaggaagaaaatgg
gtagttagttatcagtgggtaattcagtcttttaaagaaggaaggatactggatgaggag
aattttgaagttagaggagatgtaatcaatgggagaaaccaccacggtcctaagagggct
agacagtctctcactgaaaagatctttaaagactttgagatctgttgctatggacctttc
actgatatgactacagaacatctagaatggatggtggagctttgtggtgcctctgtagtg
aagcaacttcatctgttcacacacaaaacaaattctacttctgtcgtggttgtgcagcca
gatgcgtggatggaaaacacagattatagagcaatccagcaaaagaacaatgttgccatg
gtgactcgagagtgggtattagacagtgttgcttgctatgagtgccaggagttcgatgct
taccttgtgtcctaa
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integrated database retrieval system
