Ciconia boyciana (Oriental stork): 140662453
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Entry
140662453 CDS
T10948
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cboy Ciconia boyciana (Oriental stork)
Pathway
cboy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cboy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140662453 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cboy03041
]
140662453 (EFTUD2)
Spliceosome [BR:
cboy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140662453 (EFTUD2)
Complex C
U5 SnRNP specific factors
140662453 (EFTUD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
140662453
NCBI-ProteinID:
XP_072742006
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All DBs
Position
22:6001576..6023783
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagtttgggaactacatcgggccggagctggactcggac
gatgacgacgacgagttgggcagagagtccaaggatctggacgagctcgaggatgatgat
gatgatgacgatatgggagaccatgacgaggaccaccctgggatggaggtggtgctgcac
gaggataagaaatactatcccaccgccgaggaggtctacgggcctgaagtagagacaata
gtacaagaggaagacacgcagcctctcactgagcctattattaaacctgtgaaaaccaaa
aaattctcgctgatggaacagacgttaccggtcaccgtctatgagatggatttcctggca
gatctgatggacaactcggagctaattcgaaatgtgactctgtgtgggcaccttcaccat
ggcaagacgtgttttgttgactgcctgatagaacagacacacccagaaatccggaagcgc
tatgaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtaggg
atcaagagcacaccagtgactattgttctgccggacaccaaaggaaagtcttttctcttc
aacatcatcgacactccaggtcatgtcaatttttctgacgaggtgacagctggccttcgt
atttcggacggcgttgtacttttcattgatgcggctgagggggtgatgctgaacacagag
aggctgatcaagcacgcagtgcaggaaaggctcgcagtgaccgtgtgcatcaacaagata
gaccgactgatcctggagctgaaattgccacctacagacgcttattacaaactccgacat
attgtagacgaagttaatggtctgatcagcatgtattccaccgatgagaacctcgttctg
tcgccccttctggggaacgtgtgtttctccagttcacagtacagcatctgcttcacgctg
ggatcttttgcgaagatttatgcagacacatatggagatatcaattatcaggagtttgca
aagcggctttggggtgacatctacttcaacccgaagacccgcaaattcactaaaaaggcc
ccaacaagcagttcccagcgcagttttgtggagttcattctggagcccctgtacaagatc
ttggctcaggtggtgggggacgtggacacgaccctgcccaggactctggatgaactaggc
atccacctgaccaaagaggaattgaaattgaacattcggcccctcctgcggcttgtctgc
aagaagttctttggggaattcacaggctttgtggacatgtgtgtgcagcatatcccctcc
ccaaaggtgggagccaagacgaaaatcgagcatacctacacgggtggcgtcgactctgat
ctaggggaggccatgagtgaatgcgaccctgacggtccgctgatgtgtcacacaacgaaa
atgtacagcacagacgacggcgttcagttccacgcctttggcagagtgctcagtggtacc
atccatgctgggcagcctgtgaaggtccttggagaaaactataccctggaagatgaggag
gattcccagatctgcaccgtcggacgcctctggatttcggttgcgaggtaccacattgag
gtaaaccgggttcctgctggcaactgggtgctgatagaaggagtggaccagcccatagtg
aagactgcaaccgtcacagagcctcggggcaatgaggaggctcagatcttccgtcctttg
aagttcaacaccacatctgtcatcaaaatagctgtagagccggtcaacccctcagagctc
cccaaaatgttagatggtctccgcaaagtcaacaagagttacccctcacttactactaag
gtggaagagtctggggagcacgtgatcctggggacgggggagctctatctggattgtgtg
atgcatgatctacggaagatgtattcagagattgatatcaaggttgccgatccagttgtg
acattctgcgagacggtggtggaaacatcctccctaaagtgctttgctgagacacccaac
aagaagaacaagatcacgatgattgctgagcctctggagaagggactcgcagaggacatt
gaaaatgaagtggtccagataacatggaacagaaagaagctgggtgaattcttccagacc
aaatatgactgggatttgctggctgcccgttccatctgggcctttgggccagatgccact
ggcccaaacatcctagtagacgatacgctgccctcagaggtggacaagtcgctgctgggt
tctgtgaaggacagcattgtgcagggatttcagtgggggaccagggaagggcctctctgt
gatgaattgatccgcaacgtgaagtttaagatcctggatgcagtgattgctcaggagccc
ttgcaccggggtggaggacagatcatcccaacggcccggagagtggtgtattctgctttc
ctgatggccacccctcgcctcatggagccctactacttcgtggaggtgcaggctcctgcc
gactgcgtatctgcggtgtacacagtcctggccaggcggagaggccacgtgacgcaagat
gctccaatcccgggctcccctctctacaccatcaaagccttcatcccagccattgattca
tttgggtttgagacagacttgaggacccacacgcagggacaagccttctcgctctctgtc
ttccaccactggcagattgtacctggtgaccccttggacaagagcatcgtcatccgaccc
ctggagccccagccagccccgcatctggccagagagttcatgatcaagaccaggcgtagg
aagggcttgagtgaggacgtgagcatcagcaagttctttgacgaccccatgttgctggag
ctggccaagcaagacgtcgttctcaattaccccatgtga
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