Caenorhabditis briggsae (nematode): CBG_01321
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Entry
CBG_01321 CDS
T01054
Name
(RefSeq) Protein CBG01321
KO
K08536
liver X receptor alpha
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CBG_01321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbr03000
]
CBG_01321
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cbr03310
]
CBG_01321
Transcription factors [BR:
cbr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
CBG_01321
Nuclear receptors [BR:
cbr03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
CBG_01321
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
8578074
NCBI-ProteinID:
XP_002636079
WormBase:
CBG01321
UniProt:
A8WQ49
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Position
V:4313473..4315204
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AA seq
373 aa
AA seq
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MSPPESSNNTNSTTSRKGGKRSKNYKHLPQNQSPTECRICEKPAIGFHYEVPCCNTCKVF
FRRAIITGYNLECYRPNQCSRMNGLLFQFFGVVEEDLLDKMVQKLTMVESGIEPMCREGV
PLGYRDSRLLEDILTSPPILTYSKIPNLEICPPECFIGKCNHRRCNNAVHSSFLASIESS
KMFDFFPKLNLDSKEHLLKHVTAVCSTMTSAYFSISDLKFDVLVQPNGTYDRITLNEDAE
KSAVIAYTNAQQKTLACFLRNIIDRIEYLHFKAIMLCNPAVSNLTLFDQHILGVERNKYL
KSMYNYCRLQCGKVQGPNRFAEILAMAPIIENQAKKQKDFHVYVKTRHLLQHEELGHAEQ
AVVNFMLDQVMEA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaccagaatcttcgaataatacaaattccaccacttctcgcaaaggaggaaag
cgctcaaaaaactataagcatcttccacagaatcaatccccaaccgagtgtagaatttgt
gaaaagccagcaattgggttccattatgaagttccatgttgcaacacctgcaaagtgttt
ttccgacgagcaattatcactggttataatttggaatgttatagaccaaaccaatgctcc
cgtatgaatggtcttctatttcagtttttcggggtagttgaagaagatttattggacaaa
atggtgcaaaagttaacaatggttgaaagtggaatcgagccaatgtgtcgggaaggtgtg
ccactgggatatcgggattcacgactgttagaagatattctcacctcaccgccaattctg
acatattccaaaattccaaacttggagatttgtccaccagaatgttttattggaaagtgc
aaccatcggagatgcaacaacgccgtacatagcagcttcttggcatcaatcgaatcatcc
aaaatgttcgatttcttccccaaattaaatttagactctaaagagcatcttctaaagcat
gtcaccgcggtgtgctctacaatgaccagtgcatatttctcaatcagtgatctgaaattc
gatgtactggtacagccaaacggaacttatgatagaatcactctgaacgaggatgctgag
aaaagcgcggtcatcgcctatacaaatgctcagcagaagacgttggcttgttttttaaga
aatataattgaccgaatcgagtatcttcatttcaaagcgatcatgttatgcaaccctgct
gtgtcaaatctaacacttttcgatcaacacattctcggagtggaacgaaataagtatcta
aaatccatgtacaactactgccgacttcaatgcggaaaagtgcaaggaccaaatcggttt
gcagagattctagcgatggcaccaattatcgagaatcaagccaagaaacaaaaggatttc
catgtttacgttaagactagacacttgttacagcatgaggaattgggacatgctgaacaa
gcggttgttaattttatgcttgatcaagttatggaggcatga
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