KEGG   Caenorhabditis briggsae (nematode): CBG_12304
Entry
CBG_12304         CDS       T01054                                 
Symbol
Cbr-nth-1
Name
(RefSeq) Protein CBR-NTH-1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CBG_12304 (Cbr-nth-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_12304 (Cbr-nth-1)
Enzymes [BR:cbr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CBG_12304 (Cbr-nth-1)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CBG_12304 (Cbr-nth-1)
 Prokaryotic type
     CBG_12304 (Cbr-nth-1)
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH Amdase
Other DBs
NCBI-GeneID: 8584705
NCBI-ProteinID: XP_045094822
WormBase: CBG12304
LinkDB
Position
III:complement(<12735677..>12739470)
AA seq 289 aa
MPKRLIATSSSSSSSSSESKIVKAEDSGNSSGNSENATWRRDVALIQKMRADMVAPVDTM
GCHKLADPLAEPKIHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIQTIRAFPVSDLE
KILCPVGFYKRKAVYIQQTAKILEDSYSGDIPDTLDGLCSLPGVGPKMANLVMQIAWGKC
EGIAVDTHVHRISNRLGWIKTTTPEKTQKALESLLPRSEWQPINHLLVGFGQMLCQPVRP
KCATCLCRLTCPSSTAKTGEKVEKLAKKSRKTVKIEKEDAFEVKEEPDF
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcctaagcgtctgattgccacgtcatcgtcttcttcttcttcttcttctgaatccaaa
attgtcaaagctgaagattctggaaattcttctggaaattctgaaaatgccacgtggcgc
cgcgacgtggcgcttattcaaaaaatgagagccgatatggtggcgccagtcgacactatg
ggatgccataagcttgccgatccattggcagagccaaaaattcatcgtttccaagtgctc
gtcgccctaatgctctccagtcaaactcgtgacgaagtaaacgccgccgcgatgaaacga
ctcaaagatcacggactgtcgattcagacgattcgggcgtttccagtgtcggacttggag
aagattttgtgtccagtcgggttttataagcgcaaagccgtctatatccaacaaacggcg
aaaattctagaagacagctattcaggagacattccagacaccctagatggcctgtgctct
ctgccaggcgtcggaccgaaaatggcgaatttggtgatgcaaatcgcgtggggaaagtgt
gagggcatcgctgttgacacacatgttcatcgcatttccaatcgattgggctggatcaaa
accacgacccccgaaaagacccaaaaagccctggaatctcttctcccacgaagcgaatgg
caaccgattaatcatctcctcgtgggctttggacagatgctctgtcagccagtccgccca
aagtgtgccacgtgtctttgccggctcacttgtcccagttcgacagcgaaaaccggcgaa
aaagtggaaaaattggcgaaaaaatcgagaaaaacggtcaaaattgaaaaggaagatgct
ttcgaagtcaaggaggagcccgatttttaa

DBGET integrated database retrieval system