Caenorhabditis briggsae (nematode): CBG_16529
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Entry
CBG_16529 CDS
T01054
Name
(RefSeq) Protein CBG16529
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CBG_16529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_16529
Membrane trafficking [BR:
cbr04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
CBG_16529
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
8583849
NCBI-ProteinID:
XP_002641855
WormBase:
CBG16529
UniProt:
A8XPF1
LinkDB
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Position
III:complement(<7541952..>7543899)
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AA seq
511 aa
AA seq
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MISFEDFLLRPSKVVDPFNRFVAKIDPFLTLVEFCQVIGPRPLAVVSQQPNDKIRGVDIN
EMAIWLMSSDTVPGTMIVLENNQTGIHAAAYYFNLYDMRARAFQRNLCIAYLCSEKPTKE
LLNHFSTTMKTLVSPVLICNRRLFIRHVTDIVKFSDSVDETTLKQYYTLNGDSQKLTDAS
RFNIVFEQTRLLKSKFLTKRFQEMAFEDDICCGHNTENMGEAEDIICSFRVPSIPLSPID
TLTPCAYESIIPKLRQLCSELNQANSLSSTGALFCGLRPIATVAPITTSSHSWDLDSEHL
NSNEKGEETLKAITGHLGDVLFPLLCGEDMVICGAEQRRSTVEDMLVKIGKVIPKERANL
VEQDVQMEKDPNKIGKGLGGLLCNRSETGKLARWRTVLDMNRCILKTFSYDGVLLSGLNK
KRKFPSDRSLVMFIIAYLTNICQLAYICRYLFIRSPNSIDMVMGDQQKISFDDERILICL
LMGIDFEKFNRLKQSSNKDGRGAKPSRTINL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgttcgaagatttcctcctccgcccttccaaggttgtcgatccattcaatcgt
ttcgtagcaaaaattgacccgtttctcactcttgtggaattttgtcaagtgattggaccc
agacctctcgctgttgtctctcaacaaccaaacgacaaaatccgcggagtcgacatcaat
gagatggcgatatggctcatgtcgtcagatacagtacctggtacaatgattgttttggaa
aataatcaaacagggatccacgcagctgcatattacttcaatttgtatgatatgcgagca
agagcctttcagagaaatctatgtatcgcgtatttatgctctgaaaaacccacaaaagag
cttctgaaccatttttcaacgacaatgaagacactagtttcacctgttttaatttgcaac
cgacggttattcattcgacatgtcaccgatattgttaagttttcagacagcgttgatgaa
accactctaaaacagtattacacattaaatggagattcacagaagctcactgatgccagc
agattcaatatagttttcgagcaaacacgacttctgaaaagtaaattcctaaccaagaga
ttccaagaaatggcgttcgaagatgatatttgttgtggtcataacacagaaaatatggga
gaagccgaagacatcatatgctcatttcgagttccttctattccattgagtcccatcgac
actttgactccatgtgcgtacgaatcaataatacctaaactgcgacaactttgttccgag
ctgaatcaagccaacagtctctctagtacaggcgctctgttctgtggtcttcgtccaatt
gctacagtagcaccaataaccacatcatcacattcgtgggatttggattcagaacatttg
aattcaaatgaaaaaggagaagaaacattgaaagcaattaccgggcatttgggtgatgtt
ctcttcccgctactttgcggtgaagatatggtaatttgtggtgctgaacaaagaaggagt
acagtcgaagatatgttggtaaaaataggaaaagttattcctaaagagagggcgaatctt
gtggaacaagatgtgcagatggagaaggatcccaacaaaattggcaagggattaggagga
cttctgtgtaatcgaagtgaaactggaaaactggctcgatggaggaccgtacttgacatg
aatagatgcatcctaaaaacgttcagctacgacggtgtactcttatccggtctcaacaaa
aaaagaaaatttccttctgatcgatctctggttatgttcataattgcatatctgaccaac
atctgccaattggcttacatatgtcgttatctgtttatccgatcaccaaactctatagat
atggtgatgggagatcagcagaaaatcagttttgacgatgaacgaatactgatttgtttg
ctgatgggtatcgatttcgaaaagttcaatcgactgaagcaatcatcgaataaagacggg
agaggtgcgaaaccgagtagaactattaatctgtga
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