KEGG   Caenorhabditis briggsae (nematode): CBG_16529
Entry
CBG_16529         CDS       T01054                                 
Name
(RefSeq) Protein CBG16529
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    CBG_16529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbr04131]
    CBG_16529
Membrane trafficking [BR:cbr04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    CBG_16529
SSDB
Motif
Pfam: SMCR8_C Folliculin
Other DBs
NCBI-GeneID: 8583849
NCBI-ProteinID: XP_002641855
WormBase: CBG16529
UniProt: A8XPF1
LinkDB
Position
III:complement(<7541952..>7543899)
AA seq 511 aa
MISFEDFLLRPSKVVDPFNRFVAKIDPFLTLVEFCQVIGPRPLAVVSQQPNDKIRGVDIN
EMAIWLMSSDTVPGTMIVLENNQTGIHAAAYYFNLYDMRARAFQRNLCIAYLCSEKPTKE
LLNHFSTTMKTLVSPVLICNRRLFIRHVTDIVKFSDSVDETTLKQYYTLNGDSQKLTDAS
RFNIVFEQTRLLKSKFLTKRFQEMAFEDDICCGHNTENMGEAEDIICSFRVPSIPLSPID
TLTPCAYESIIPKLRQLCSELNQANSLSSTGALFCGLRPIATVAPITTSSHSWDLDSEHL
NSNEKGEETLKAITGHLGDVLFPLLCGEDMVICGAEQRRSTVEDMLVKIGKVIPKERANL
VEQDVQMEKDPNKIGKGLGGLLCNRSETGKLARWRTVLDMNRCILKTFSYDGVLLSGLNK
KRKFPSDRSLVMFIIAYLTNICQLAYICRYLFIRSPNSIDMVMGDQQKISFDDERILICL
LMGIDFEKFNRLKQSSNKDGRGAKPSRTINL
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgatttcgttcgaagatttcctcctccgcccttccaaggttgtcgatccattcaatcgt
ttcgtagcaaaaattgacccgtttctcactcttgtggaattttgtcaagtgattggaccc
agacctctcgctgttgtctctcaacaaccaaacgacaaaatccgcggagtcgacatcaat
gagatggcgatatggctcatgtcgtcagatacagtacctggtacaatgattgttttggaa
aataatcaaacagggatccacgcagctgcatattacttcaatttgtatgatatgcgagca
agagcctttcagagaaatctatgtatcgcgtatttatgctctgaaaaacccacaaaagag
cttctgaaccatttttcaacgacaatgaagacactagtttcacctgttttaatttgcaac
cgacggttattcattcgacatgtcaccgatattgttaagttttcagacagcgttgatgaa
accactctaaaacagtattacacattaaatggagattcacagaagctcactgatgccagc
agattcaatatagttttcgagcaaacacgacttctgaaaagtaaattcctaaccaagaga
ttccaagaaatggcgttcgaagatgatatttgttgtggtcataacacagaaaatatggga
gaagccgaagacatcatatgctcatttcgagttccttctattccattgagtcccatcgac
actttgactccatgtgcgtacgaatcaataatacctaaactgcgacaactttgttccgag
ctgaatcaagccaacagtctctctagtacaggcgctctgttctgtggtcttcgtccaatt
gctacagtagcaccaataaccacatcatcacattcgtgggatttggattcagaacatttg
aattcaaatgaaaaaggagaagaaacattgaaagcaattaccgggcatttgggtgatgtt
ctcttcccgctactttgcggtgaagatatggtaatttgtggtgctgaacaaagaaggagt
acagtcgaagatatgttggtaaaaataggaaaagttattcctaaagagagggcgaatctt
gtggaacaagatgtgcagatggagaaggatcccaacaaaattggcaagggattaggagga
cttctgtgtaatcgaagtgaaactggaaaactggctcgatggaggaccgtacttgacatg
aatagatgcatcctaaaaacgttcagctacgacggtgtactcttatccggtctcaacaaa
aaaagaaaatttccttctgatcgatctctggttatgttcataattgcatatctgaccaac
atctgccaattggcttacatatgtcgttatctgtttatccgatcaccaaactctatagat
atggtgatgggagatcagcagaaaatcagttttgacgatgaacgaatactgatttgtttg
ctgatgggtatcgatttcgaaaagttcaatcgactgaagcaatcatcgaataaagacggg
agaggtgcgaaaccgagtagaactattaatctgtga

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