KEGG   Caenorhabditis briggsae (nematode): CBG_18317
Entry
CBG_18317         CDS       T01054                                 
Symbol
Cbr-ran-1
Name
(RefSeq) Protein CBR-RAN-1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03008  Ribosome biogenesis in eukaryotes
cbr03013  Nucleocytoplasmic transport
cbr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CBG_18317 (Cbr-ran-1)
   03008 Ribosome biogenesis in eukaryotes
    CBG_18317 (Cbr-ran-1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    CBG_18317 (Cbr-ran-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_18317 (Cbr-ran-1)
   03009 Ribosome biogenesis [BR:cbr03009]
    CBG_18317 (Cbr-ran-1)
   03016 Transfer RNA biogenesis [BR:cbr03016]
    CBG_18317 (Cbr-ran-1)
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_18317 (Cbr-ran-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbr04147]
    CBG_18317 (Cbr-ran-1)
   04031 GTP-binding proteins [BR:cbr04031]
    CBG_18317 (Cbr-ran-1)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     CBG_18317 (Cbr-ran-1)
Ribosome biogenesis [BR:cbr03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    CBG_18317 (Cbr-ran-1)
  Pre-60S particles
    CBG_18317 (Cbr-ran-1)
Transfer RNA biogenesis [BR:cbr03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    CBG_18317 (Cbr-ran-1)
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     CBG_18317 (Cbr-ran-1)
   Spindle formation proteins
    CBG_18317 (Cbr-ran-1)
Exosome [BR:cbr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CBG_18317 (Cbr-ran-1)
GTP-binding proteins [BR:cbr04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    CBG_18317 (Cbr-ran-1)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RNA_helicase Gtr1_RagA AAA_24 Pox_A32 Septin AAA_7 ArgoMid AAA_16 DUF5906 ATPase AAA_22 AAA_33
Other DBs
NCBI-GeneID: 8584316
NCBI-ProteinID: XP_002642322
WormBase: CBG18317
UniProt: A0AAE9DB65 A8XSE9
LinkDB
Position
III:complement(5225085..5225917)
AA seq 215 aa
MSGGDGIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRF
NVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCG
NKVDVKDRKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPNLEFVAMPA
LAPPEVQMDPAMIAEYEKDLDNAAKADLPDDDDDL
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtctggtggagacggcatcccaactttcaagcttgtcctcgttggagatggaggtacc
ggaaagaccactttcgtcaagcgtcacttgactggagaattcgagaagaagtatgtcgct
acacttggagtcgaagtacatccactcgtcttccacaccaatcgcggacaaattcgtttc
aacgtgtgggacactgctggacaagagaagtttggtggtcttcgtgacggatactatatc
caaggtcaatgcgccatcatcatgttcgatgtcactgctcgtgtaacctataagaatgtt
ccaaactggcatcgtgacttggccagagtatgcgaaaacatcccaattgttctctgcgga
aacaaggttgacgtcaaggatcgtaaagtcaaggccaagactatcactttccaccgaaag
aagaaccttcaatactacgacatttccgccaagtccaactacaacttcgaaaagccattc
ctttggctcgccagaaagctgctcggagatccaaatctcgagttcgttgccatgccagct
ttggctcctccagaggttcaaatggacccagccatgattgctgaatacgagaaggatctg
gacaacgccgccaaggctgatcttccggatgacgacgacgatctttaa

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