KEGG   Caenorhabditis briggsae (nematode): CBG_20368
Entry
CBG_20368         CDS       T01054                                 
Symbol
Cbr-snr-2
Name
(RefSeq) Protein CBR-SNR-2
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CBG_20368 (Cbr-snr-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_20368 (Cbr-snr-2)
   03041 Spliceosome [BR:cbr03041]
    CBG_20368 (Cbr-snr-2)
   03032 DNA replication proteins [BR:cbr03032]
    CBG_20368 (Cbr-snr-2)
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CBG_20368 (Cbr-snr-2)
Spliceosome [BR:cbr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CBG_20368 (Cbr-snr-2)
  U2 snRNP components
    CBG_20368 (Cbr-snr-2)
 Complex B
  U1 snRNP components
    CBG_20368 (Cbr-snr-2)
  U4/U6.U5 tri-snRNP components
    CBG_20368 (Cbr-snr-2)
 Complex C
  U2 snRNP components
    CBG_20368 (Cbr-snr-2)
DNA replication proteins [BR:cbr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CBG_20368 (Cbr-snr-2)
SSDB
Motif
Pfam: LSM Izumo-Ig
Other DBs
NCBI-GeneID: 8588520
NCBI-ProteinID: XP_002646524
WormBase: CBG20368
UniProt: A0AAE9DWQ8 A8XXM6
LinkDB
Position
I:12202286..12202849
AA seq 160 aa
MTISKNNKMMAHLNYRMKIILQDGRTFVGFFKAFDKHMNILLAECEEHRQIKPKAGKKAD
GEEKRILGLVLLRGEHIVSMTVDGPPPRDDDSVRLAKAGGAGGVGQAKPGGRGMPAMPGM
PGMPPGGPPGGLSGAMRGHGGPGMSAMQPGYGGPPGGRPY
NT seq 483 nt   +upstreamnt  +downstreamnt
atgaccatctcgaagaataacaagatgatggctcatctgaactatcggatgaagatcatc
cttcaggacggcagaacattcgtcggattcttcaaggccttcgacaagcacatgaacatt
ttgctcgcagagtgcgaagagcacagacagatcaagccaaaggccggaaagaaggccgat
ggtgaagagaagcgaattctgggtctcgtgcttcttcgtggagaacacatcgtctcgatg
accgtcgacggaccaccaccaagagacgacgactcggttcggttggcgaaggccggagga
gccggtggagtcggacaagccaagccaggaggccgtggaatgccagcgatgccaggaatg
ccaggaatgccaccaggcggaccaccaggcggtctctctggagccatgcgcggtcacgga
ggaccaggaatgtcggcgatgcagccaggatatggaggaccaccaggaggacgtccatat
taa

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