Caenorhabditis briggsae (nematode): CBG_20680
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Entry
CBG_20680 CDS
T01054
Name
(RefSeq) Protein CBG20680
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CBG_20680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_20680
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
CBG_20680
Membrane trafficking [BR:
cbr04131
]
SNARE
SNARE associated proteins
Others
CBG_20680
Domain-containing proteins not elsewhere classified [BR:
cbr04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
CBG_20680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
Motif
Other DBs
NCBI-GeneID:
8573514
NCBI-ProteinID:
XP_045097107
WormBase:
CBG20680
UniProt:
A8XYD0
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All DBs
Position
II:11091740..11093835
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AA seq
601 aa
AA seq
DB search
MTPAPAPTPAQKQKQEKIRADLQKELDNVVKAAIASPHSKRENVPSEITQNLCNSIEAIF
IHGLRDPFFLKGTRYAKYPEPNFWPFVSKFSHRSITNQIACLGQVRTEIGKGRAWIRIVL
NENALSQYLDLLSTETTAIQQFYSEDAFLRLLFHSDHSERIRGFLKPLTSLPISAATNSS
FLNTWTPTPLILAGLMAGEPLKVGVLKARPNPKPAHLTEDIAFVAIDALVSEEDQEIGSP
SYIERQKRKSLARPIRKSVNDNHSDTSSVYSHPSMLDSGEMTYQHAVVGSLKRDPASSGN
LRRAPSNQRLLLPQSPLFSSTPVDTTILDQVKTRKRTNSDFEQVVGAVAPDAPADYQPII
VSRRVRRPSNRKSDSRSSSGSTSKDSYHRTKAIPTRDSRANSDLPSTIFGTVPNDVAFSP
EAEELKIRSKPISATIDSGIAEMAAASTCNTRATSEVEPDLLGEETGLEERSLSFIEALH
ELETTVEESVLAPRSVSLTDNFLDQKLKENNKTEDDEEVFDVSMDPEEGTSTRLPSEPLV
TRSKPVTIQTGSRRQLIHRRQQKVCSDTSFSRKIFVFFAPVVMTCCSVIKALFLGRVTFS
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagctccagctccaacgccggcacagaaacagaagcaagaaaaaatccgtgca
gatttacaaaaagagcttgataatgttgtcaaggcagctattgcttcgccacattcgaaa
cgagagaatgtccctagtgaaattactcaaaatctctgtaactccatcgaggctatattt
attcatggattgcgcgatcctttcttcttaaaagggacacgatatgcaaagtatcctgaa
cctaatttttggccattcgtttccaaattctcccatcgatcgatcaccaatcaaatcgcg
tgtttaggacaagttcgtaccgaaatcggcaaaggtagggcttggattcgaatagttctg
aacgagaatgcactgagtcaatatctggacttgttatccacagaaactactgctattcag
caattctattctgaagacgcgttcctaaggcttctattccactctgaccattcggaacga
atccgaggctttttaaaacctctaacctcacttcctatatctgctgcaacgaattcttca
tttctcaatacatggacaccaactccactaattttagccggattaatggctggtgaacct
ttgaaagtcggtgttttgaaagcccgtccaaatccaaaaccagctcacttgacggaagac
attgcatttgtagctattgatgcacttgtttctgaagaagatcaagaaattggatcgcct
tcttatattgaaagacaaaaaaggaagtctctagcaaggccaattagaaaatccgtaaac
gacaatcactcggatacttcatccgtttactcacatccttcaatgttggattctggggag
atgacctatcaacacgcagttgttggtagtctgaaacgagatccggcgtcttctggaaat
cttcgtcgggcgccgtccaatcaacggcttctgcttccccaatctcctctgttctcttcg
acacccgtggataccacaattctagaccaagtgaaaactcgcaagagaacgaattctgat
tttgagcaagtcgttggagcagtggctccagatgcaccggccgattatcaaccaataatc
gtttctagaagagttaggagaccgtcaaatcgaaaatccgattcgagaagctcgagtgga
tcaacatctaaagatagttatcatagaacaaaagccattcccacgcgagattccagagca
aatagtgatctgccatcaacaatttttggaactgtgcccaatgatgtagcattttcccca
gaagctgaagaacttaagattcgatcgaaaccaatttctgccactattgatagcgggatt
gccgagatggctgctgcatctacatgcaatacaagggcaacatcagaagttgaaccagat
cttcttggggaagaaactggacttgaagaaagatctttgtcgtttatcgaggctttgcac
gaattagagacaaccgtcgaagaaagtgttctagcaccccggagtgtatcgctcactgat
aactttttggatcaaaagttgaaagaaaacaataaaacggaagacgatgaagaagttttc
gatgtctctatggatccagaagaaggaacctccacgaggctaccatctgagcctctcgtc
actcgaagcaaacctgtcacgatacaaactggaagtcgacgacaattaatacacaggaga
caacaaaaggtttgttcagacacctcgttttcccggaaaatttttgtcttttttgctcct
gtcgttatgacatgttgctctgttatcaaagccttgtttctaggtcgtgtgaccttctcc
agataa
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