Caenorhabditis briggsae (nematode): CBG_22096
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Entry
CBG_22096 CDS
T01054
Name
(RefSeq) Protein CBG22096
KO
K13138
integrator complex subunit 1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_22096
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
CBG_22096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
INTS1_RP2B-bd
INTS1_INTS2-bd
INT1_R3
PDZ_3
Motif
Other DBs
NCBI-GeneID:
8580872
NCBI-ProteinID:
XP_002638877
WormBase:
CBG22096
UniProt:
A8Y1I6
LinkDB
All DBs
Position
I
Genome browser
AA seq
1612 aa
AA seq
DB search
SPRSDAQNTQLEVFLEFLKPWFETIRGEVLPKPLFRALCLLCGSENVRQFISSRLEIWIT
LQKFHREISELLLVLGTNINVKQYEMDREMIDVLLKLNTKNMKTRTVVGPFNVCLRRICD
LPANVEIVLESLVVNETGPPQNRSNNNVQTIYMILNSHTEEATKALARITSRELIKEKEN
SVKMLRAFFREMIRGFYQQKTGEFPFAAFAETVFKEVLRRGEADEVPLLMCDMVSQMPLI
TLTAVITTRENAFSTKYNTPLPTGDYPMISTEAKIAKEKFKAEYVAFAENCIEFLISSRK
LFQTDGTYLASFYLLLFLESNRDVYPGIEMAVVTEAEMTTCVRVFGECGLSEKMFLMLCH
EGTNQLSPRSLIDLISALTHRAVTHQSQTSTVPLISFSDPFELIDSFLQMTIYPESDLPR
LDPPICQRNLYWIAWNIIILWIAGGSEICGKFAKIYESYTVLRYMIHCIMTRKFEFPRDF
EGKSAGIMAEEEAAMESSEAIVLNMYRKKLDRGMPVEAMAFLERSAFRAPSLMDEIRHLS
DRYQLASRFAKCQSPPLLSQLIQTVGAQNSLFAIREMLSVDASTAKRLTSECIFHSLIYY
FDSHRLRDLDQNSSHVVKAVRGKKQCNLIQNNYFQLILQAEKNLKSAESVDEDFLLQSFV
SSLASPQFSIRSAAVNTFSKLFPPSDEDKPFDLGKLSLVPRFDSRKSTYLETMASAILVE
TDAHLANSYLHFLTKNSMENEDDHRIARAICQILSTDCQQLHTSLCDYFVQYVDMCSEIH
KIKESTPIDDSLCCLDIGTSRIALSREVPVAVVKLLSKFDTKNMEKGGKSTPFEMLVQFW
LSPGRIPKMVDRQTGETRQFLNLPMRKEMLKSAEQRVVDAALEDLSETDAQEFVLVSQMS
RETAEKVFRKAENMKIQSLDRQTLSNMYLLLRGYRMTGVKSGELLLNRIKEEMDRLDSIV
LKEEPMEIQMPENETKPEGFLRLAMLCTAEKSLVFTSGTMEKMEANDISNWLKTHCAALV
SAKSKSAPIFRVPSAFIQSAMNDEKCSLSCLSHIEANLKFFLSHESAFQTLSVIIDSAAN
KFDFVRKRLETFSAKILKSVTPPPSVIGILQKHAANSQKSSQTTPKNHKIAASTFSEFAG
ALKKVSSDQKDEKRLIGEFMTTFVKDKGEVVDSEDVYVFIRSLLKVYAGENSETVEKCLS
NRWSPQLRAIVCSVVLEKYSPGICAAFVFRLLSAYCEKYPVASFNELFMIRKGEEGLVLN
TNAINVCVFYFCDVATDTDDYDTQIVSLISALETQGGTRIGYLFARALLQTCCANASPIR
RRTAQRLLELLSDSLLYLQYKVGMVSSLRVLSNIESRDSCIRRCEQIVDRIVEMALDPSA
QLSEDICEEEREKDPKELEKEKEAAAAANESKFKRGFDKRGGGGPLAKKGRFITPKDLPG
PLGATTTKAADDGEDSNSNDEPIVVAKREWIETSHAITRFNSLKFPVLANYVSRLSAMSR
KDLKEEKRINKVELVLQSVVTLCQYMKPDEMNSVDTALSNCLEFFEKHLEEGGYGVKEQT
AFAELTIKACAEYLNHSFLEARSFLRDNRTLVERVCKRCHDRYNVEMVLDNC
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
agcccccgctctgacgcccaaaacacccaactggaagtatttctggaatttctaaagccc
tggttcgagacaattcgtggagaagtcctcccaaaaccacttttccgtgctctatgcctc
ctttgtggatcagaaaacgtgcgtcaattcatctcgagtcgactggagatctggataaca
ctacagaagtttcatcgagaaattagtgaactcctactggtgctcggtacgaatatcaat
gtaaaacagtacgaaatggaccgcgaaatgattgatgtgctgctcaaattgaatacgaaa
aatatgaagacgcgaaccgtcgtcggtccattcaacgtctgcctccgccgcatctgtgat
ctgccggccaacgtggaaatcgttctcgaatccctcgtcgtcaatgaaaccggaccaccg
cagaatcgttcaaataacaacgtccaaacgatttatatgattctgaacagtcatacagaa
gaggcaacgaaggcgttggcgagaatcacaagtagagaattgatcaaagagaaggagaat
tcggtgaagatgttaagagcgttcttccgcgaaatgatacgtggattttatcagcaaaaa
actggcgaattcccgttcgctgcgtttgcggagactgttttcaaggaggttttgagacga
ggagaagcggatgaagtaccccttctaatgtgtgacatggtctcccaaatgccgcttatc
accctaaccgcagtgataacaactcgtgagaatgccttctccaccaaatacaacactcct
ctacccaccggagactacccgatgatctcaactgaagccaaaatcgccaaagagaaattc
aaggccgaatacgtggcatttgctgagaactgcattgaattcctgatctcctcccggaaa
ttgttccaaacggatgggacctacttggcgagtttctacctgctcttattcttggaatcc
aatcgagacgtctatccgggtatcgagatggctgtggtgacggaagcagaaatgacaact
tgtgttcgggtgtttggagagtgtggattgtcggagaagatgtttttgatgctatgccat
gagggaacgaatcaactatcgccccgatctctaatcgatttgatctctgctctaacccac
cgtgcagtgactcatcaatctcaaacatctacagtacccctcatcagcttctccgatccc
tttgaactcatcgattcgttcctacaaatgacaatctacccggaatccgatttgccacgt
ctcgatccgccgatttgtcaacggaatctctactggatcgcatggaacatcatcatttta
tggatcgccggtggatcggaaatttgcggaaaattcgcgaaaatctatgagagctacacc
gttttgagatacatgattcattgcataatgacgaggaaatttgaattcccgcgcgatttc
gaagggaaatccgccggaattatggctgaggaagaggcggcgatggagagttcagaagcc
atcgttttgaatatgtataggaagaagctggatcgaggaatgcccgtggaggcgatggcg
tttttggagagatccgctttccgtgctccatccctaatggatgaaatccgtcatttatcg
gatcgatatcaattggcttcccgtttcgccaaatgccagtcaccaccattgttatctcaa
ctgattcaaaccgttggagctcaaaactctttgttcgcaatccgcgaaatgttgtctgtc
gatgcatctactgccaagcgtctcacatctgaatgcatatttcattccctgatttactat
tttgatagtcatcgattgagagatttggatcagaattccagtcatgttgttaaagcggta
aggggtaaaaaacaatgtaatttgatacaaaataattattttcagctaattcttcaagcc
gaaaaaaatctgaaatccgcggaatcggtggatgaagacttcctgctccaatcattcgtt
tcgtctctagcttcccctcaattttcgattcgttcggcagctgtgaatacattttcgaag
ctattcccaccgtcggacgaggataagccattcgatttggggaaattatcattggttcca
cgctttgattcgagaaaatcgacatatttggagacgatggcgagtgcgattctggtggaa
accgatgcgcatctggcgaactcgtatttgcattttttgaccaaaaatagtatggaaaac
gaagatgatcataggattgcccgtgcgatttgtcagattctctccaccgactgtcaacag
ctacacacatcgctgtgtgattactttgttcaatacgtggatatgtgttcagaaattcat
aaaatcaaagagtcaacccccattgacgattctctatgctgtctggatatagggacatct
cgaattgcattaagtcgagaagttccagtcgctgttgtcaagctattatcgaaatttgat
acgaaaaatatggaaaaaggagggaagagtacaccattcgagatgttggttcagttctgg
ctatctcctggtcgtattcccaaaatggtggatcgtcaaaccggtgaaactcgtcaattt
ctgaatcttccaatgcgcaaagaaatgctcaaatcggctgagcaacgagtcgtcgacgcg
gcactagaggatttatctgagaccgatgcacaggaatttgttttagtatcacaaatgtca
agagaaactgccgagaaggttttcagaaaagctgaaaatatgaaaatccaatcgctagac
cgtcaaacgctgtcaaatatgtatctactgctacgtggctaccgtatgactggagtgaaa
tcaggcgaattgcttctaaatcgaataaaagaggagatggatcggctggattcgatagtt
ctaaaagaggaaccaatggaaattcaaatgcctgaaaacgagacgaaacccgagggtttt
ttgcgcctagcaatgctttgtacagctgagaaatcgttggttttcacaagtggaactatg
gaaaaaatggaagcgaatgatatttcgaattggttgaagacgcattgtgcggctttggta
agcgcaaaatccaaaagcgccccgatattccgcgttccatcggcgttcatccaatcggca
atgaacgatgagaagtgctcgctctcgtgtctatcccacattgaagccaatttgaaattc
ttcctctctcacgaatccgcatttcagacactatcagttatcattgattccgccgctaat
aagtttgatttcgttcgaaagcgtctggaaaccttctcagcgaagattctgaaaagtgtc
actccaccaccgtcagtcattggaatcctccaaaaacacgctgcgaatagtcaaaaatcc
agtcaaaccaccccgaaaaatcacaaaatcgcagcctcgacattctcggaattcgctgga
gcccttaagaaagtttcgtcggatcaaaaagacgaaaaacgactcatcggcgagttcatg
acgacgtttgtgaaggacaaaggagaagtggtggattcggaagacgtctacgtcttcatc
agaagtcttctgaaggtctacgctggcgagaattccgaaaccgtcgagaagtgtctctcg
aatcgatggagtcctcagttgagagccatcgtgtgttcggtggtcctggagaagtattcg
ccgggcatttgtgcagctttcgtgtttcgactgctctcggcatactgtgaaaagtatcct
gtcgcttcgtttaacgaactttttatgatcagaaaaggagaagagggtctggtgttgaac
accaacgcaatcaacgtttgcgtcttctatttttgtgatgtcgccaccgacacggatgac
tacgacacgcaaatcgtctctctaatcagtgcgctcgaaacccaaggaggcactcgaatc
ggctacctcttcgcacgagctctcctccagacgtgctgtgcgaacgcgtcgccaatccgc
cgtcgaaccgctcaacgtcttctggaacttctctcggactcgctgctctatctacagtac
aaagtgggcatggtgtcgtcattgcgagtgctgagcaatatcgaatcgcgggattcgtgt
attcggagatgtgagcagattgtggatcgaatcgttgagatggcactggatccgagtgca
cagttgtccgaggatatatgtgaagaggagagggagaaggacccgaaagagctcgagaag
gagaaggaggcggcagcggcagcgaacgagtcgaaattcaaacgaggatttgacaagaga
ggcggaggaggtccattggctaaaaaagggagatttatcacgccgaaagatctacccgga
ccactgggagccaccacaacgaaagcagcggacgatggagaggatagtaattcgaacgat
gaaccgattgtggtggctaagagagaatggattgagacatcgcacgccattaccagattc
aattcgttgaagttcccagtgctcgccaactatgtatcccgattgagcgcaatgtcaaga
aaagatctaaaagaagaaaaacgaatcaacaaagtggaattggtgcttcagtcggtggtg
accctctgtcaatacatgaaaccggatgagatgaattcagtggacacggcactttcgaat
tgtctggaattcttcgagaagcatctagaagagggtggatacggtgtgaaggagcagacg
gcgttcgccgagttgaccatcaaagcgtgtgctgagtatttgaatcacagctttttggag
gcccgatcattccttcgcgacaaccggacccttgtggaacgagtctgtaaacggtgtcat
gatcgatacaacgtggaaatggtcctggataattgt
DBGET
integrated database retrieval system
