Caenorhabditis briggsae (nematode): CBG_22280
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Entry
CBG_22280 CDS
T01054
Name
(RefSeq) Protein CBG22280
KO
K13140
integrator complex subunit 3
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_22280
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
CBG_22280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ints3_N
HEAT_Ints3_C
DUF7386
ASD2
Motif
Other DBs
NCBI-GeneID:
8581025
NCBI-ProteinID:
XP_045097534
WormBase:
CBG22280
LinkDB
All DBs
Position
I:complement(3094209..3098540)
Genome browser
AA seq
1046 aa
AA seq
DB search
MNEQFARRVQKLMKINMKCEVPPEIISRLVNDSIGLDNRITGKSDKEVIDILILKDDQHD
SKSIGLMYHILTSADNLELYQRIIRFINGGGVEYWHNVLCNMNMILFECWPHIHLACREQ
LVRLIREAIRQNVKQIENVLMNAYRVANGCFDNVSKQRIFAKLAAIIRENDAWFKSQKAA
AALVGNIITCTTSVISYTPAPITASDTFRESMTDFVCWVIRNRKMDCLTLGRDFMLVLIR
LGRLPQVEEIWKDILMNPSSYGVASTEDYWGKNHYLQHVRISIELERKIMFMVHNGGKNL
LIYFSWFSNKYFRGNDGPALRAECVRHLLYMTMDPAKVPPAAFENRIQLLHLIVSTAPPG
PEQQWLKLCLFADWFGCDDRNPTNFNYVELPLNVVRYALFLSPSTPHPNSIVQGSHCSQF
ANSLLEYVCKSVDVLQPSSAEYIRRNVNNAMRYCRDRLQHNLAQILENSKIDRKVSELLR
VVFPDFVRNPNGSSLIRPAKKKEDQPPAPITKPRASSSDEKSSTSSATPPVTIDKPSSSN
TDRLQKEKEDKEDKDLKSLVKLLRGEIGVKMEALRAQWKDLDDDADKCETIEALLQHMLN
TEENFDEAQQDLAAQCLQAIMGSVVTPEQSLLPEKEKDLSEAFTHPVYSFMKILCSPPDN
DDNSREMLTTMMAAMREKDSSLTYVLLYFIKGTYGTSANKVISCYRDIAKISGRGVDEML
ATDLQLCAVNDNRLFGYLFIFSFVQFEKEVMESPMLMATLCANLDASQLRKFLSEIIREE
IKLFRKDTFSKMLMESVEWSTAAQWIFWHLVHADGVPVEWFLSCVPRMDSKIHDEAISNM
LLMLKRMDREPWPGLIRSIFQRLPQKDDKFPIDALKVLIEDSDQCGKIAEIVSSLLKTLI
SQNDILGVGIKSTKKGQQYKLTVQQVLEHLQHFSATCVEKKNKNTEAFLGKHVMQEAFAS
IRANEKSNLLVKKYSNLFGAMDIIAQEHKEQSSSRTLRGNRQGSAGDKPSSSQQSKRKGG
DMDDDSNSKKRKVHSPIIELSDSDSD
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaattcgcgaggcgcgtgcaaaagttgatgaaaatcaacatgaaatgcgag
gtgcctcctgaaatcatatctcgactcgtcaatgactcgattggtcttgataatcgtatc
actgggaaatcggacaaggaggtcatcgacatcctaattctcaaagacgaccaacatgac
tccaaatccataggcttaatgtatcatattcttacgagtgctgataatttagagctttat
cagaggattatccgattcatcaacggcggtggcgtggagtattggcacaatgtgctctgc
aatatgaatatgattcttttcgaatgctggccacacatacatctggcgtgtcgagagcag
ctggttcgtctgattcgagaggcgattcgacaaaatgtgaaacagattgagaatgtgctc
atgaacgcgtatagagtggcgaatggctgttttgataatgtatcgaagcagaggattttt
gcgaagctcgccgccataattcgtgagaacgacgcctggttcaaatctcaaaaagcagcc
gctgcactcgttggaaacattatcacatgcactacatccgttatctcctatacgccagcc
ccaattaccgcttcagacacattccgagaatctatgacggatttcgtctgctgggtgata
aggaatcggaaaatggattgtttaacactaggaagagattttatgttggtccttattcgt
cttggacggctaccacaagtcgaggagatctggaaggatattctaatgaatccctctagt
tatggagtggcttcaacggaagactattggggaaagaatcactatctacaacatgttcga
attagtatcgagttggagaggaaaatcatgtttatggtgcataatggaggaaagaacttg
ttgatttatttctcttggttctcgaataaatacttccgagggaatgatggaccggcgttg
agggcagagtgtgttcgacaccttctgtatatgacgatggatccagcgaaagtgccgcca
gctgcgtttgaaaatcggattcagttgctgcatttgatcgtttccacggcgccgcccggc
ccagaacaacaatggctgaaactctgtctatttgccgattggttcggttgtgacgatagg
aatccgacgaacttcaactacgtggaactacccctgaacgttgtcagatacgccctcttc
ctgtctccatctacaccccatcccaactccatcgttcaaggctctcattgctcgcaattt
gccaattctcttctggaatatgtatgtaaatcggtagacgttcttcaaccatccagtgcc
gagtacatccgtcgcaacgtcaacaatgccatgagatattgtagagataggcttcaacac
aatcttgcgcagattttggagaactcgaaaatcgacagaaaagtgtccgaattgctgcgc
gtcgttttcccggattttgtgaggaatcccaatggaagttcattgataagaccagctaag
aagaaggaagatcaaccaccagctccaatcacaaagccaagagcatcatcgtcagatgag
aagtcgtcgacctcttctgcaacgcctccagtgactattgacaagccttcttcatcaaat
accgataggttacaaaaggagaaagaggacaaggaagataaagatttgaagtcgttggta
aaactgttgagaggggaaataggtgtgaaaatggaggcgttaagagcgcaatggaaggat
ttggatgatgatgcggataagtgtgagacgattgaagccttgttacagcacatgttgaat
acggaagaaaactttgacgaagcgcaacaagatctggctgcacaatgccttcaggctatt
atgggttctgtagtgacccccgaacaatcattgctacctgaaaaggagaaggatctatca
gaagcgttcacacatcctgtctactcgtttatgaagattctctgctccccgccggataac
gatgacaactctcgagaaatgctaacgacaatgatggctgcaatgcgggagaaggattca
tcgctgacatatgtgctcctctatttcatcaaaggaacctatggaacatcagcgaataaa
gtgatatcttgctatcgagatattgcaaaaataagtggtcgaggtgtcgatgagatgttg
gccacggatttgcaattgtgtgctgtgaatgataatcgattgttcggttatctcttcatc
ttctcatttgttcaattcgaaaaggaggtcatggagagtccgatgctaatggctacactc
tgtgcgaatctagacgcctctcagttgagaaagttccttagtgagattattagagaggaa
atcaaactgtttcgcaaggacacattctccaaaatgctcatggaatcggtggaatggtcg
acagcggcacaatggatcttctggcatctagtgcacgctgatggcgttccagtagagtgg
tttttgagttgtgtgccacgaatggattctaagattcatgacgaggcgatttcgaatatg
cttctgatgctgaaaaggatggatcgggaaccatggcccggtctaattcgatcgatattc
caacggctgcctcagaaggatgataagttcccaatcgatgcgctgaaagtgcttatagaa
gattcggatcagtgtggcaaaatcgctgaaatcgtctcctccctactcaaaactctaata
tcgcaaaacgacattctgggcgtcggaataaaatccaccaagaagggtcaacaatacaag
ttgactgtgcaacaagtcctcgaacaccttcaacactttagtgccacgtgtgtcgagaag
aagaacaagaatacagaagccttccttggcaaacatgttatgcaggaagcatttgccagt
attagagcaaacgaaaaatcaaatttgctcgtcaaaaagtacagtaatctgttcggcgca
atggacattattgctcaggagcacaaggagcagtcatcgtcaagaacattgagaggcaat
agacaaggatccgctggagacaagccttcatcgtcacagcagtcgaagcggaaaggaggt
gatatggatgacgattcgaacagcaagaagcgcaaggtgcacagtccgataatagagttg
agcgattcggattccgactaa
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integrated database retrieval system
