KEGG   Caenorhabditis briggsae (nematode): CBG_23090
Entry
CBG_23090         CDS       T01054                                 
Name
(RefSeq) Protein CBG23090
  KO
K05692  actin beta/gamma 1
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03082  ATP-dependent chromatin remodeling
cbr04145  Phagosome
cbr04814  Motor proteins
cbr04820  Cytoskeleton in muscle cells
cbr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CBG_23090
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    CBG_23090
  09142 Cell motility
   04814 Motor proteins
    CBG_23090
   04820 Cytoskeleton in muscle cells
    CBG_23090
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    CBG_23090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_23090
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_23090
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_23090
   03029 Mitochondrial biogenesis [BR:cbr03029]
    CBG_23090
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cbr04812]
    CBG_23090
   04147 Exosome [BR:cbr04147]
    CBG_23090
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     CBG_23090
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     CBG_23090
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     CBG_23090
    NuA4 complex
     CBG_23090
  Chromatin remodeling factors
   BAF complex
    CBG_23090
   PBAF complex
    CBG_23090
   GBAF(ncBAF) complex
    CBG_23090
   SWR1 complex
    CBG_23090
Mitochondrial biogenesis [BR:cbr03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    CBG_23090
Cytoskeleton proteins [BR:cbr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     CBG_23090
Exosome [BR:cbr04147]
 Exosomal proteins
  Proteins found in most exosomes
   CBG_23090
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 8578424
NCBI-ProteinID: XP_002636429
WormBase: CBG23090
UniProt: A0AAE8ZU49 A8Y4R0
LinkDB
Position
V:9985433..9986714
AA seq 376 aa
MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtgtgacgacgaggttgccgctcttgttgtggacaatggatccggaatgtgcaaagcc
ggattcgcaggagacgacgctccacgcgccgtgttcccatccatcgtcggaagaccacgt
catcaaggagtcatggtcggtatgggacagaaggactcgtacgtcggagacgaggcccaa
tccaagagaggtatcctcaccttgaagtacccaattgagcacggaatcgtcaccaactgg
gatgatatggagaagatctggcaccacaccttctacaacgagcttcgtgttgccccagaa
gagcacccagtcctcctcaccgaagccccacttaacccaaaggctaaccgtgaaaagatg
acccaaatcatgttcgagaccttcaacaccccagccatgtacgtcgccatccaagccgtc
ctctccctttacgcttccggacgtaccaccggagtcgtcctcgactctggagatggtgtc
acccacactgtcccaatctacgaaggatacgctctcccacacgccatcctccgtcttgat
ttggccggacgtgatcttactgactacctcatgaagatcctcaccgagcgcggttactct
ttcaccaccaccgctgagcgtgaaattgttcgtgacatcaaggagaagctctgctatgtc
gccctcgacttcgagcaagaaatggccaccgctgcttcttcctcttcccttgagaagtcc
tatgagcttcctgacggacaggtcatcaccgtcggaaacgaacgcttccgttgcccagag
gctctcttccagccatccttcttgggtatggagtccgccggaatccacgagacttcttac
aactcgatcatgaagtgcgacattgatatccgtaaggacttgtacgccaacaccgttctc
tctggaggaaccaccatgtacccaggaatcgctgaccgcatgcaaaaggaaatcaccgct
cttgccccatcaaccatgaagattaagatcatcgccccaccagagcgcaagtactccgtc
tggatcggaggatctatcctcgcctccctctccaccttccaacagatgtggatctccaag
caagagtacgacgagtccggcccatccatcgtccaccgcaagtgcttctaa

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