KEGG   Caenorhabditis briggsae (nematode): CBG_23090
Entry
CBG_23090         CDS       T01054                                 
Name
(RefSeq) Protein CBG23090
  KO
K05692  actin beta/gamma 1
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03082  ATP-dependent chromatin remodeling
cbr04145  Phagosome
cbr04517  IgSF CAM signaling
cbr04518  Integrin signaling
cbr04519  Cadherin signaling
cbr04814  Motor proteins
cbr04820  Cytoskeleton in muscle cells
cbr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CBG_23090
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    CBG_23090
   04518 Integrin signaling
    CBG_23090
   04519 Cadherin signaling
    CBG_23090
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    CBG_23090
  09142 Cell motility
   04814 Motor proteins
    CBG_23090
   04820 Cytoskeleton in muscle cells
    CBG_23090
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    CBG_23090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_23090
   03019 Messenger RNA biogenesis [BR:cbr03019]
    CBG_23090
   03036 Chromosome and associated proteins [BR:cbr03036]
    CBG_23090
   03029 Mitochondrial biogenesis [BR:cbr03029]
    CBG_23090
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cbr04812]
    CBG_23090
   04147 Exosome [BR:cbr04147]
    CBG_23090
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     CBG_23090
Messenger RNA biogenesis [BR:cbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     CBG_23090
Chromosome and associated proteins [BR:cbr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     CBG_23090
    NuA4 complex
     CBG_23090
  Chromatin remodeling factors
   BAF complex
    CBG_23090
   PBAF complex
    CBG_23090
   GBAF(ncBAF) complex
    CBG_23090
   SWR1 complex
    CBG_23090
Mitochondrial biogenesis [BR:cbr03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    CBG_23090
Cytoskeleton proteins [BR:cbr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     CBG_23090
Exosome [BR:cbr04147]
 Exosomal proteins
  Proteins found in most exosomes
   CBG_23090
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 8578424
NCBI-ProteinID: XP_002636429
WormBase: CBG23090
UniProt: A0AAE8ZU49 A8Y4R0
LinkDB
Position
V:<9985433..>9986714
AA seq 376 aa
MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtgtgacgacgaggttgccgctcttgttgtggacaatggatccggaatgtgcaaagcc
ggattcgcaggagacgacgctccacgcgccgtgttcccatccatcgtcggaagaccacgt
catcaaggagtcatggtcggtatgggacagaaggactcgtacgtcggagacgaggcccaa
tccaagagaggtatcctcaccttgaagtacccaattgagcacggaatcgtcaccaactgg
gatgatatggagaagatctggcaccacaccttctacaacgagcttcgtgttgccccagaa
gagcacccagtcctcctcaccgaagccccacttaacccaaaggctaaccgtgaaaagatg
acccaaatcatgttcgagaccttcaacaccccagccatgtacgtcgccatccaagccgtc
ctctccctttacgcttccggacgtaccaccggagtcgtcctcgactctggagatggtgtc
acccacactgtcccaatctacgaaggatacgctctcccacacgccatcctccgtcttgat
ttggccggacgtgatcttactgactacctcatgaagatcctcaccgagcgcggttactct
ttcaccaccaccgctgagcgtgaaattgttcgtgacatcaaggagaagctctgctatgtc
gccctcgacttcgagcaagaaatggccaccgctgcttcttcctcttcccttgagaagtcc
tatgagcttcctgacggacaggtcatcaccgtcggaaacgaacgcttccgttgcccagag
gctctcttccagccatccttcttgggtatggagtccgccggaatccacgagacttcttac
aactcgatcatgaagtgcgacattgatatccgtaaggacttgtacgccaacaccgttctc
tctggaggaaccaccatgtacccaggaatcgctgaccgcatgcaaaaggaaatcaccgct
cttgccccatcaaccatgaagattaagatcatcgccccaccagagcgcaagtactccgtc
tggatcggaggatctatcctcgcctccctctccaccttccaacagatgtggatctccaag
caagagtacgacgagtccggcccatccatcgtccaccgcaagtgcttctaa

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