Corvus brachyrhynchos (American crow): 103611832
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Entry
103611832 CDS
T08418
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103611832 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbrc03000
]
103611832 (KDM2A)
04121 Ubiquitin system [BR:
cbrc04121
]
103611832 (KDM2A)
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103611832 (KDM2A)
Enzymes [BR:
cbrc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103611832 (KDM2A)
Transcription factors [BR:
cbrc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103611832 (KDM2A)
Ubiquitin system [BR:
cbrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103611832 (KDM2A)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103611832 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103611832 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
Ribosomal_60s
LRR_4
Motif
Other DBs
NCBI-GeneID:
103611832
NCBI-ProteinID:
XP_008627622
UniProt:
A0A091ED13
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGK
DFTVEYIQRGGLRDPLIFRSSDGLGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIE
MSMAQWARYYETPEEEREKLYNVISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQN
LELYENWLLSGKQGDIFLGDRVSECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFL
HSFNIPMQLRIYSIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLS
MDMELSSSDSVNMEEEEEEEDDEDAAGKESRRPVTRRSILTSPIANGANVDYDELGRSCR
SSLPGLKKTPSIDSSDSSRGSQNGQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESL
PLHKKCVPTGIEDEDALIADVKLLLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVR
LPTIPITKPHTMKPTPRPTPVRSTVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMK
KFGGPGRMKQSCVLRQCLAPRLPHSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPG
CLQMDGEGLLNDELPNCWECPKCYQGDDAEKGQKRKVEESDEDTAQAKVLRPLRSCEEPL
TPPPNSPTPMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTM
VREKENNPSGKKELSEVEKAKLHGSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHS
PRVVVRHAPARMPLRSGGDEEAAAEEEEEEEEEEDENAEEGGAARLNGRGGRAQEGEESC
VQREVWMSVFRYLTRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKR
QPVSLDLSWTNISKKQLTWLVNRLPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAV
GIKDPQIRDLLTPPTDKPSQDNRSKLRNMIDFRLAGLDITDATLRLIIRHMPLLSRLDLS
HCNHLTDQSANLLTAVGSSTRNSLTELNMAGCNKLTDQALLYLRRISNVTLIDLRGCKQI
TRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaggaagaacggatccgttacagccaaagactgcgtggcacgatgaggcgg
cgttacgaggatgacggcatctccgatgatgagatcgaagggaagaggacgtttgacctc
gaggaaaagctgtccaccaacaagttcaactccaccttcgtggtcttcatggaaggcaaa
gacttcacagttgagtacatccagcggggtggcctgagggacccgctcatcttcaggagc
tcggacggcctggggataaagatgccggatccagacttcagcgtgaatgatgtgcggctg
tgtgtggggagccgacggatggtggatgtgatggatgtgaacacgcagcgggacatcgag
atgtccatggcgcagtgggcgcgctactacgaaacgccggaggaggagcgcgagaaactc
tacaacgtcatcagcctggagttcagccacaccaaactggagaacctggtgcagagacct
gctacggtggatttgattgactgggttgataacatgtggcccaggcacctgaaggaaagt
cagacagagtctaccaatgccatcctggagatgcagtatccaaaggtgcagaaatactgt
ctgatgagtgtcaagggctgttacacagatttccacgtggactttggtggcacttctgtg
tggtaccacatccaccgagggggaaagatcttctggctgatccctcccacaccccagaac
ctggagctctatgaaaactggcttctctcagggaagcagggagacattttccttggggac
agagtgtcagagtgccagcgcatcgagctcaagcagggctacacatttgtcatcccctca
ggttggatccacgctgtgtacactcccatggacacgctggtttttgggggcaacttctta
cacagcttcaacatccctatgcagctccggatctacagcatcgaggaccgcacacgggtc
ccaaataagtttcgctatcccttctattacgagatgtgttggtacgtgctggagcgctac
gtgtactgcatcaccagccgctcccacctgaccaaggacttccagaaggaatccctcagc
atggatatggagctgagctcctcggactcggtgaacatggaagaggaggaggaggaggag
gatgatgaggacgcagcagggaaggaatcccggcgccccgtgaccaggaggtccattctc
accagccccattgccaacggtgccaacgtggactatgacgaactgggcaggagctgccgg
agcagcctgccggggctcaagaagaccccatccatagactcttccgactccagccggggc
tcccaaaacggccaggcctgggacccgagtgggggcagcccccgcaagagcaggaaggtg
cacctgacccagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcgctc
cctctgcacaagaagtgcgttcccaccggcatcgaggacgaggacgccctcatcgctgat
gtcaagctgctgttggaagaatacgcaaacagcgaccctaaactggcacttacaggcgtc
cccatcgtccagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgc
ctgcccaccatccccatcaccaagccgcacaccatgaagccaacgccgcgcccgactccc
gtcaggtccacggtgtctcccatcgtgtcgggcgcccggcggaggcgggtgcggtgccgg
aaatgcaaggcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaag
aagttcggcgggcccggccgcatgaagcagtcctgcgtcctccggcagtgcttggcgccc
aggctgcctcactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcg
caggactttgagaagaagctcatggagtgctgtatctgcaatgagatcgttcaccccggc
tgtctgcagatggatggggaagggctgctcaatgatgagctccccaactgctgggagtgc
cccaagtgctaccagggtgacgacgcagagaagggccagaagcggaaggtggaggagagc
gacgaagacacggcgcaagccaaggtgctgcggcccctgcggagctgcgaggagcccctg
acccccccgcccaactcgcccaccccgatgctgcagctgatccacgaccccgcgtccccc
cgcggggtggtgacgcgctcgtccccgggggccgggcccagcgaccaccacagcgccagc
cgggacgagcgcttcaagcgccggcagctgctgcggctccaggccacggagaggaccatg
gtgcgggagaaggagaacaaccccagcggcaagaaggagctgtcagaggtggagaaagcc
aagctgcacggctcctacctcaccgtgacgcttcagcgccccaccaaagatgtccacggc
acttcgatcgtccccaagctccaagccatcacggcctcctcggccaacctgcagcactcg
ccgcgcgtggtcgtgcgccacgcgcccgccaggatgcccctgcggagcgggggcgatgag
gaggcggccgccgaggaagaggaggaggaagaggaggaggaggacgagaacgcggaggag
gggggggcggcccggctgaacgggcgtgggggccgggcgcaggagggcgaggagagctgc
gtccagcgcgaggtctggatgtccgtgttccgctacctcacccgcagggagctttgcgag
tgcatgcgggtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaag
atagacttgagcaggtgcaagtccatcaccccccaggcgctgagcggcatcatcaaaagg
cagccggtcagcctcgacctcagctggaccaatatctcaaaaaaacagcttacatggctc
gtcaacaggctgccaggcctgaaagacctcatcctggcgggctgttcctggtctgcggtc
tgcgctctcagtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagta
ggaatcaaggaccctcagatccgggacttactcacgcctccaacagacaaacccagtcag
gacaatcgcagcaaactccgcaacatgatcgacttccggctcgccgggctggacatcacg
gatgccacgctgcgcctgatcatccgccatatgcccctgctctcccgcctcgacctcagc
cactgcaaccacctcacggaccagtcggccaacctcctcaccgccgtgggctcttccaca
cgcaactccctcaccgagctcaacatggcaggctgcaataagctgacggaccaggccttg
ctgtacctgcgccgtatctccaacgtcaccctcatcgacctgcggggctgcaaacagatc
acccgcaaagcctgtgagcacttcatctcggacctgtccatcaacagcctctactgcctg
tccgatgagaagctgatccaaaaaatcagctag
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integrated database retrieval system
