Corvus brachyrhynchos (American crow): 103612909
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Entry
103612909 CDS
T08418
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc00280
Valine, leucine and isoleucine degradation
cbrc00650
Butanoate metabolism
cbrc00900
Terpenoid backbone biosynthesis
cbrc01100
Metabolic pathways
cbrc03320
PPAR signaling pathway
Module
cbrc_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
103612909 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
103612909 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103612909 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
103612909 (HMGCS1)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
103612909 (HMGCS1)
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Paralog
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Lectin_C_term
Cullin
Motif
Other DBs
NCBI-GeneID:
103612909
NCBI-ProteinID:
XP_008628850
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MPGSLPVNAESCWPKDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQARMGFCS
DREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDV
EGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYASGNARPTGGAGAVAML
VGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYTVYRNKI
HAQWQKEGTDRRFTLNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNPETANGVFSGLE
AFRDIKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQ
YSPEQLAGQRISVFSYGSGFAATLYSIRVTQDATPGSALDKITASLSDLKTRLDSRKCIA
PDVFAENMKLRQETHHLANYIPQCSVEDLFEGTWYLVRVDEKHRRTYARRPLMSDGPLEA
RVGVVHPGIVHEHIPSPAKKVPRIPATTESEGVTVAISNGEH
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtctcttccagtgaatgctgagtcctgctggcccaaagatgtgggaattgtg
gcactggaaatctattttccctctcagtatgttgaccagaccgagctggagaagtatgat
ggtgtggatgctgggaagtacaccattgggctaggccaggcaaggatggggttctgctct
gaccgggaggatatcaattccctctgcctgactgtggttcagaagctcatggagaggaac
agcctctcctacgattgtatcgggagattagaagttggaacggagaccataattgataaa
tcaaaatctgtgaagactgtcctgatgcagctttttgaagagtctggtaatacagatgtg
gaaggaatcgacaccaccaatgcatgctatggaggcactgctgctctttttaatgctatt
aattggattgagtccagttcctgggatggacgctatgccctcgtggtggctggagacatc
gctgtgtatgcctctggaaacgccaggcccactgggggagctggtgctgttgcaatgctg
gtcggcccaaatgcaccattgatttttgagagagggctgcgtggtacccacatgcagcat
gcgtatgacttctataaaccagacatggtctctgaatatcctgtagtggatggcaagctc
tccatacagtgctacctcagtgcattagaccgctgctataccgtctatcgcaacaaaatc
cacgcccagtggcagaaggaggggacagacagacgtttcaccttgaatgactttggattc
atgatcttccattctccgtactgtaaactggtgcagaaatccgtggctagactcttgctg
aatgactttctcagtgaccagaacccagaaacagcaaatggtgttttcagtggtctggaa
gctttcagggatataaaacttgaagatacatactttgacagagatgtggaaaaagctttt
atgaaagctagtgcagagctcttcaatcagaaaaccaaagcttcattacttgtatccaat
cagaatggaaatatgtataccccttcagtctatggttgccttgcctctcttctagcccag
tactccccagagcagcttgcgggacagagaatcagtgtgttctcatatggctctggtttt
gctgctaccctgtattccatcagggtcacacaggatgccactcctggttctgcactggac
aaaataactgccagcctttctgatctcaaaacgagacttgactcaagaaaatgtattgca
cctgatgtctttgctgaaaacatgaagctcagacaggaaacacatcatttggccaattat
attccacagtgttcagtcgaggatctctttgaaggaacatggtaccttgtgcgtgtggat
gaaaaacacaggagaacttacgcccggcgcccactcatgagtgatggacctctggaagca
agagttggagttgtccacccaggcattgttcatgagcacatcccaagccctgctaagaaa
gtgccaagaatccctgcaacaacagaatctgaaggcgttactgtcgccatttccaatggg
gagcattaa
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