Corvus brachyrhynchos (American crow): 103613391
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Entry
103613391 CDS
T08418
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc00514
Other types of O-glycan biosynthesis
cbrc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
103613391 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103613391 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cbrc01003
]
103613391 (RFNG)
Enzymes [BR:
cbrc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
103613391 (RFNG)
Glycosyltransferases [BR:
cbrc01003
]
Glycan extension
O-Glycan
103613391 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
103613391
NCBI-ProteinID:
XP_008629393
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
LGAAGSSARESLELKDIFIAVKTTRKYHKSRLDLLLQTWISQARGQTFIFTDWEDRELRL
KAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNPRTLLHLLSAF
SHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFWFATGGAGFCISRGLALKMSPWASLG
NFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLQGESVLQQVTLSYGD
PENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWCPAKKMS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ctcggggccgccggcagctcggccagggagagcctagagctgaaggacatctttattgcg
gtgaagaccacgaggaagtaccataagagccgcctggacttgctcctccaaacctggatc
tcccaggcgaggggacagacgtttatattcacagactgggaggatcgggagctacgcctg
aaagcaggggatcatatgatcaacaccaactgttccgctgttcatacccggcaagctctc
tgctgcaagatgtctgtggaatatgataaattcctggaatctgggcaaaaatggttttgc
catgtggatgatgacaactacgtgaaccctcggactctcctgcatctcttgtctgccttc
tcacacagccaggacgtctatgtggggcgaccgagcctggaccatcccatcgaagcagct
gaccatgtccaaagtgatggatcaaagacaactgtgaaattctggtttgccacaggtgga
gctgggttctgtatcagccgaggtcttgccctgaagatgagtccctgggccagcctgggc
aatttcatcagtactgcagaaagagtgcgtcttcccgatgactgcactattggctacatc
atcgaagggctgctggaggtaaagctgctacacagcccgttgttccattcccacctggaa
aatctgcagagactacaaggcgagtctgtgctgcagcaggtaaccctgagttacggtgac
cctgagaacaaacacaatgtcgtgagtgtgggaggagtgtttggccttcagcaagatcca
acccgatttaaatctgtccattgtctgctttatcctgacactatttggtgccctgctaag
aagatgtcataa
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