Corvus brachyrhynchos (American crow): 103616394
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Entry
103616394 CDS
T08418
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin-like
KO
K19949
otoferlin
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbrc04131
]
103616394
Membrane trafficking [BR:
cbrc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103616394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
dsrm_Ferlin
FerI
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
103616394
NCBI-ProteinID:
XP_008632817
LinkDB
All DBs
Position
Unknown
AA seq
1925 aa
AA seq
DB search
MALVLQLRSVSGLRGKGDRIAKAAFRGLSFYTRVLENCEDEAKFDETFRWPVATNIDGNE
ILEIQVFNYSKVFTNRLIGTFRMVLQKVVAEGQLEVTDTLIDDNNSAIQTSISIEIRYQA
LDGTVGTWNDKEFLETPSVHSEGDGRYSLETDSLLSGHRHGSDVSPGKSNQQSMERSFRS
KGKEKTKEHKAGKGVFSAMKLGKTRPSKDEHRKQDDPAVLETEDLDRKAMRYRAGLEPDT
ISLASVTAVTTNVSNKRSKPDIRMEPSAGRPMDYQVSVTIIEARQLVGLNMDPVVCVEVG
EEKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRSGTLVGSFKMD
VGTVYTQPEHQFYHKWAILSDPEDLTAGLKGYLKCDIAVVGKGDNIKTPHKANETDEDDI
EGNLLLPDGVPPERQWARFYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVAF
AGQKGKTSIQKSSYEPLWNEQIIFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHFIDLRKI
SNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARLLLGLAVEILDT
TNPEINSSTEVQVEQATAVADNCSGKMEEFFLFGAFLEATMIDRKIGDKPINFEVTIGNY
GNQVDGSSKPLLRRKKEGGDGDEEESELLQNSSEDEGGEDGELVSVSSSQPMKPLVTDRN
YFHLPYLEKKPCIYIRSWWQDQRRRLYNANIMDKIADKLEEGLNDVQEMIKTEKPHPERR
LRGVLEELSSGCLRFLTLADKDQHHSSRTRLDRERLKSCMRELENMAQQATALRSQVKRN
TMKDKLKLVQNFLQKLRFLADEPQHTIPDVFLWMMSNNKRIAYARIPSKDILYSIVDEEM
GKDCAKVKTVFLKLPGKRGFGPAGWTVQAKMEIYLWLGLNKQRKDFLSGLPCGFEEKKTP
RGQNLPSFPPISLLYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFISQSQCTEVL
NETLCPTWDQLLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKM
SDEQYCPPRFPPQLEYYQIYRGNATAGDLLAAFELLQIGPGGKSDLPPIDGPTDMDRGPI
LPVPLGIRPVLSRYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIQNYKKNP
NFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHTVSSLRKFIYRPPDKKAQ
HWNMAGEIVVNMEPEVPIKKMDTMVKLEANSDAVVKVDVTEEEKEKKKKKKKGGGGGGGG
GGGEEVEEEEPDESMLDWWSKYFASIETMKEQLRQQEAAAAEAEEKEEMEIGEGSKAQAK
NKDKSKAPKDDKKKKQQPVPELPEKKKQQKIDELKVFNKELEAEFDNFEDWLHTFNLLRG
KIGDNDDNATEEERIVGRFKGSMCVYKVPLPDDITKEAGYDPTFGMFQGIPSNDPINVLV
RVYIVRATDLHPADINGKADPYIAIKLGKTDIKDKENYISKQLNPVFGKSFDIEATFPME
SMLTVAVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGVSQTYSIHGYNTWRDPMKPSQ
ILSKLCKEGKVDGPHFGPGGRVKVANRVFTGPTEIEDENGQKKPTAEHLALAXXXXXNPD
KPGIEQGRLEMWVDMFPMDMPAPGPAIDISPRKPKKYELRVIVWNTDEVILEDDDYFTGE
KSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYIFPFDYLMAEEKIVISKKESMF
SWDETEYKIPARLTLQVWDADHFSADDFLGTWRIELDLTRFPRGAKTSKQCSLEMVTNEA
ELPMISIFKQKRVKGWWPFVARDENDELEITGKVEAELHLLTAEEAEKSPAGLARNEPDP
LEKPK
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtgctgcagctccgctccgtctccggcctgcgcggcaaaggcgaccgcatc
gccaaggcggcgttccgggggctttccttctacacccgagtgctggaaaactgcgaggac
gaggccaagtttgacgagactttccgctggccggtggcgaccaacatcgacgggaatgag
atcctggagatccaagtgttcaactacagcaaagtcttcaccaacaggctcatcgggacg
ttccggatggtcctgcagaaggtggtggcggaagggcagctggaggtgacggacacgctc
atcgatgacaacaattccgccattcagaccagcatctccatagagatccggtaccaggct
ctggatgggacggtgggcacctggaatgacaaggaattcctggagacgcccagcgtgcac
tcggagggggatggaaggtattccttggagaccgacagcctcctgtccggccaccggcac
ggctccgacgtctctcctgggaaatccaaccagcaatccatggagaggagcttcaggagc
aaaggcaaggagaagaccaaggagcacaaagctggaaaaggagttttttcagccatgaag
cttggaaagacacgtccgtccaaggacgagcatcggaaacaagatgatccggcagttctg
gaaacagaagacctggatagaaaggccatgagatacagagcaggcctggagccagacacc
atctccctggcctctgtcaccgctgtcaccaccaatgtctccaataaaaggtccaagcct
gacatcaggatggagccaagtgccgggaggcccatggattaccaggtcagtgtcaccatc
atcgaggcccggcagctcgtggggctcaacatggaccccgtggtgtgcgtggaggtgggg
gaggagaagaaatacacgtccatgaaggaatccaccaattgtccctactacaacgagtat
ttcgtcttcgatttccacgtcccccccgatgtcatgttcgacaagatcatcaagctctcc
gtgatccactccaaaaacctcctgcggagcgggacactggtggggtccttcaagatggat
gttgggactgtttacacccagcctgagcaccagttctaccacaaatgggccatcctgtcc
gaccctgaggacctcacggccggcctcaagggctacctcaagtgtgacatcgccgtggtg
ggcaaaggggacaacatcaagaccccgcacaaggccaacgagacggacgaggatgacatt
gaagggaacctcctgctcccggacggggtccccccggagcggcagtgggctcggttctac
atcaagatctaccgcgccgaggggctgccgcggatgaacaccagcatcatggccaacgtc
aagaaggccctcattggggagaacaaggacctggtggacccctacgtacaggtggccttc
gcggggcagaagggaaagacatccatacagaagagcagctacgagcccctctggaacgag
caaatcatcttcacggagatgttccccccgctgtgcaaacggatcaagatccagatccgt
gactcagacaaggtcaacgacgtggccatcgggacccatttcatcgatctgaggaagatc
tccaacgaaggggacaaaggtttcctgcccacctttggccctgcctgggtgaacatgtac
ggctccacccgcaactacaccctcatggacgagcaccaggagctcaacgagggcctgggc
gagggcgtctccttccgcgcccggctcctgctgggcctggccgtggagatcctggacacc
accaaccccgagatcaacagctccaccgaggtgcaggtggagcaggccacggcggtggct
gacaactgcagtgggaagatggaggaattcttcctcttcggagccttcctggaggccacc
atgatcgacaggaagattggggacaaacccatcaacttcgaggtcaccataggtaactat
ggcaaccaggtggatggctccagcaaacccctcctgcggaggaagaaagagggaggggat
ggggacgaggaggagtcggagctgctccagaattccagtgaggatgaaggtggtgaggat
ggagagctggtctccgtttcttcatcccagcccatgaagcccctggtcacggacaggaat
tatttccacctgccctacctggagaagaagccctgcatctacatccggagctggtggcag
gaccagcggcgccggctctacaacgccaacatcatggacaagatcgcggacaagctggag
gaggggctcaatgatgtgcaggagatgatcaagacagagaagccgcacccggagcgccgg
ctccgaggggtcctggaggagctgagcagtggctgcctgcgcttcctgaccttggctgac
aaggaccagcatcactcgtcccgcacgaggctggaccgggagaggctcaaatcctgcatg
cgggagctggagaacatggcccagcaggccacggccctgcgctcccaggtcaagaggaac
accatgaaggacaagctgaagctggtgcagaacttcctgcagaagctgcggttcctggcg
gatgagccccagcacacgattcccgacgttttcctctggatgatgagcaacaacaagcgc
atcgcctacgcccgcatcccttccaaggacatcctgtactccattgtggacgaggagatg
ggcaaggactgcgccaaggtgaagacggttttcctcaagctccccgggaagagggggttc
ggacctgctggctggacagtccaggccaagatggagatctacctgtggctgggcctcaac
aagcagcgcaaggacttcctgagcggcctcccctgtggattcgaggagaagaaaaccccc
cgaggacaaaacctgccttccttcccacccatcagcctcctgtacaccaagaaacaggtt
ttccagctgcgagcccacatgtaccaagccaggagtttgttcgcagccgacagcagcggc
ctctcggatcccttcgcgcgggtcttcttcatctcccagagccagtgcaccgaggttctc
aacgagaccctttgcccaacctgggaccagctcctggtgttcgacaatgtggagctgtac
ggggaagctcacgagatgcgggatgacccccccatcatcgtcatcgagatctacgaccag
gacactgtgggaaaagctgacttcatgggccggacgttcgccaagccggtggtgaagatg
tcagacgagcagtactgccccccacgcttcccgccacagctggagtattaccagatctac
cgcggcaatgccacggccggggacctgctggccgcctttgagctgctccagatcggcccc
gggggcaagtcagacctgcccccaatcgatggccccacggacatggatcggggccccatc
ctgccagtgcctctgggaattcggccagtgctgagcagatacagagtggagatcctgttc
tgggggctcagggacctgaagagagtgaacctggctcaagtggaccggccccgtgtggac
attgagtgcgccggaaagggcgtccagtctgccctgatccagaactacaagaaaaacccc
aacttcagcactttggtcaagtggttcgaggtggacctcccggagaacgagctgctgcac
ccgcccctgaacatccgggtggtggactgccgggccttcgggcgctacaccctggtgggc
tcccacaccgtcagctccctccgcaagttcatctaccgcccgcccgataagaaagcccag
cactggaacatggcaggggagatagttgtcaacatggaacccgaggttcccatcaagaag
atggacacgatggtgaagctggaagctaattccgatgcagtggtgaaggtggatgtgacc
gaggaagagaaggagaaaaagaaaaagaagaagaaaggaggaggaggaggaggaggagga
ggtggcggggaggaagtggaggaggaggagccagacgagagcatgttggactggtggtcc
aagtacttcgcttccattgagacgatgaaggagcaactccggcagcaggaagcagctgcg
gcagaagcggaggagaaggaagagatggagatcggagagggctccaaggctcaggcgaag
aacaaggacaagtccaaggcacccaaagatgacaagaaaaagaagcagcagccagtcccc
gagctccctgagaagaagaagcagcagaagatcgatgaactcaaggtcttcaacaaagag
ctggaagcagagtttgacaactttgaggattggctgcacaccttcaacctgctccggggg
aagatcggggacaatgatgacaacgctacggaggaggagcggatagtggggaggttcaaa
ggctccatgtgtgtctacaaagtgccgctccctgatgacatcaccaaggaggctggatat
gaccccacctttgggatgttccaggggatccccagcaacgaccccatcaatgtgctggtc
cgagtctacatcgtgagggccacggacctccaccccgctgacatcaacgggaaagccgat
ccctacattgccatcaagctgggcaagacggacatcaaggacaaggagaactacatctcc
aagcagctgaaccctgtctttgggaaatcctttgacatcgaggccaccttccccatggag
tccatgctgaccgtggctgtgtacgactgggacttggtgggcaccgacgacctcattggg
gagaccaagatcgacctggagaatcgcttctacagcaagcaccgggcgacctgcggggtg
tcccagacctactccatccatgggtacaacacctggcgtgaccccatgaagccctcccaa
atcctgtccaagctgtgcaaagagggaaaagtggatgggccgcacttcgggccaggggga
agagtgaaagttgccaacagggtcttcaccggccccacggagatcgaggatgaaaatggc
cagaagaagccgacggccgagcacctggcgctggcgnnnnnnnnnnnnntcaaccctgac
aagccgggcatcgagcagggccgcctggagatgtgggtggacatgttccccatggatatg
ccagcgcctggccctgccatcgatatttctcccaggaaaccaaagaagtacgagctcagg
gtgatcgtgtggaacaccgacgaggtcatcctggaggatgacgactacttcacgggcgag
aaatccagtgacatttttgtcagggggtggctgaaggggcagcaggaggacaagcaggac
acggatgtccattaccactccctcaccggtgaaggcaacttcaactggcgctacatcttc
cccttcgactacctgatggccgaggagaagatcgtaatctccaagaaggagtccatgttc
tcctgggatgagaccgagtacaagatcccagcccgcctcaccctgcaggtctgggatgcc
gaccacttctcggccgatgatttcctgggtacgtggaggattgagctggacctgacccgc
ttcccccggggagccaagacatccaagcagtgcagcctggagatggtgaccaacgaggcc
gagctgcccatgatctccatcttcaagcagaagcgggtcaagggctggtggccgtttgtg
gccagagacgagaacgatgagctggagatcaccggaaaagtcgaagctgagctgcacctt
ctgacagcagaggaggctgagaaatcccctgctgggctggcccgaaacgagcctgatccc
ctggagaaacccaagtga
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integrated database retrieval system
